RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 PMELP40967 661 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 GATA4P43694 442 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 POU4F2Q12837 409 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 ZMYND11Q15326 602 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 LRRC28Q86X40 367 aaPredicted RBP17.4■□□□□ 0.38
CHMP6-204ENST00000572778 KLHL36Q8N4N3 616 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 SPERTQ8NA61 448 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 OR11L1Q8NGX0 322 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 TMEM186Q96B77 213 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 MBOAT4Q96T53 435 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 HIF1ANQ9NWT6 349 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 FAM206AQ9NX38 181 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 GMPPBQ9Y5P6 360 aa17.4■□□□□ 0.38
CHMP6-204ENST00000572778 YLPM1P49750 1951 aaKnown RBP17.39■□□□□ 0.37
CHMP6-204ENST00000572778 GNALP38405 381 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 MDH2P40926 338 aaKnown RBP17.39■□□□□ 0.37
CHMP6-204ENST00000572778 MPPED2Q15777 294 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 ZNF181Q2M3W8 571 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 ZNF829Q3KNS6 432 aaPredicted RBP17.39■□□□□ 0.37
CHMP6-204ENST00000572778 KLBQ86Z14 1044 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 C1orf87Q8N0U7 546 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 SPICQ8N5J4 248 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 CSNK2A3Q8NEV1 391 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 OR8S1Q8NH09 359 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 ERGIC1Q969X5 290 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 LYZL4Q96KX0 146 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 FN3KRPQ9HA64 309 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 GTF2A1LQ9UNN4 478 aa17.39■□□□□ 0.37
CHMP6-204ENST00000572778 ACOD1A6NK06 481 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 ANKRD65E5RJM6 399 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 FAM20BO75063 409 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 GRPP07492 148 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 PCMT1P22061 227 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 MZT1Q08AG7 82 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 TMED1Q13445 227 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 SNCBQ16143 134 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 TMEM155Q4W5P6 130 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 FAM201AQ5SY85 155 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 COMMD2Q86X83 199 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 PRIMA1Q86XR5 153 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 OR10H4Q8NGA5 316 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 PAPOLGQ9BWT3 736 aaKnown RBP17.38■□□□□ 0.37
CHMP6-204ENST00000572778 PBOV1Q9GZY1 135 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 C14orf119Q9NWQ9 140 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 ZNF391Q9UJN7 358 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 RHBDD3Q9Y3P4 386 aa17.38■□□□□ 0.37
CHMP6-204ENST00000572778 SONP18583 2426 aaKnown RBP17.38■□□□□ 0.37
CHMP6-204ENST00000572778 PPIAL4EA0A075B759 164 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 TRAV20A0A0B4J274 112 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 PPIAL4DF5H284 164 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 PLPP2O43688 288 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 ENTPD6O75354 484 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 OR2T7P0C7T2 308 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 PPIAL4FP0DN26 164 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 SNRPGP62308 76 aaKnown RBP17.37■□□□□ 0.37
CHMP6-204ENST00000572778 EGR3Q06889 387 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 OR8B8Q15620 311 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 ZSCAN26Q16670 478 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 KRTAP21-3Q3LHN1 58 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 PLEKHG7Q6ZR37 379 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 MUC20Q8N307 709 aaPredicted RBP17.37■□□□□ 0.37
CHMP6-204ENST00000572778 FTMTQ8N4E7 242 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 OR2T27Q8NH04 317 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 Q8TCH9 128 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 PPP1R14AQ96A00 147 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 PPP1R3EQ9H7J1 279 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.37■□□□□ 0.37
CHMP6-204ENST00000572778 PPIAL4AQ9Y536 164 aa17.37■□□□□ 0.37
CHMP6-204ENST00000572778 A0A0U1RQV5 110 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 A0A1W2PQL4 384 aaPredicted RBP17.36■□□□□ 0.37
CHMP6-204ENST00000572778 A6NLC8 198 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 E9PQ18 207 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 LOC110117498-PIK3R3F6TDL0 507 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 PNPP00491 289 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 KRT8P05787 483 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 FAM157CP0CG43 387 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 ACKR3P25106 362 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 MFGE8Q08431 387 aaPredicted RBP17.36■□□□□ 0.37
CHMP6-204ENST00000572778 MEDAGQ5VYS4 303 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 FAHD2BQ6P2I3 314 aaPredicted RBP17.36■□□□□ 0.37
CHMP6-204ENST00000572778 SSX6Q7RTT6 188 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 YIPF7Q8N8F6 280 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 BOLLQ8N9W6 283 aaKnown RBP17.36■□□□□ 0.37
CHMP6-204ENST00000572778 PLPP7Q8NBV4 271 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 FAHD2AQ96GK7 314 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 PATZ1Q9HBE1 687 aaKnown RBP17.36■□□□□ 0.37
CHMP6-204ENST00000572778 TMEM165Q9HC07 324 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 C1orf123Q9NWV4 160 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 RNF7Q9UBF6 113 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 MRM2Q9UI43 246 aaKnown RBP17.36■□□□□ 0.37
CHMP6-204ENST00000572778 NAV3Q8IVL0 2385 aa17.36■□□□□ 0.37
CHMP6-204ENST00000572778 LOC100130705A0A1B0GUX0 176 aa17.35■□□□□ 0.37
CHMP6-204ENST00000572778 ZNF850A8MQ14 1090 aa17.35■□□□□ 0.37
CHMP6-204ENST00000572778 RPP14O95059 124 aaKnown RBP17.35■□□□□ 0.37
CHMP6-204ENST00000572778 PTBP3O95758 552 aaKnown RBP17.35■□□□□ 0.37
CHMP6-204ENST00000572778 SRD5A1P18405 259 aa17.35■□□□□ 0.37
CHMP6-204ENST00000572778 MTNR1AP48039 350 aa17.35■□□□□ 0.37
CHMP6-204ENST00000572778 LCN2P80188 198 aa17.35■□□□□ 0.37
CHMP6-204ENST00000572778 SLC25A30Q5SVS4 291 aa17.35■□□□□ 0.37
CHMP6-204ENST00000572778 OR51E1Q8TCB6 317 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms