RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 OR4K13Q8NH42 304 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 OR2T6Q8NHC8 308 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 RORBQ92753 470 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 PHF21AQ96BD5 680 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 SSX3Q99909 188 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 DCTN5Q9BTE1 182 aa16.21■□□□□ 0.19
CCDC40-206ENST00000572083 NSRP1Q9H0G5 558 aaKnown RBP16.21■□□□□ 0.19
CCDC40-206ENST00000572083 DNAH9Q9NYC9 4486 aa16.21■□□□□ 0.18
CCDC40-206ENST00000572083 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.2■□□□□ 0.18
CCDC40-206ENST00000572083 NDUFB3O43676 98 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 XPNPEP2O43895 674 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 MUC1P15941 1255 aaPredicted RBP16.2■□□□□ 0.18
CCDC40-206ENST00000572083 HIST1H1CP16403 213 aaKnown RBP16.2■□□□□ 0.18
CCDC40-206ENST00000572083 UBE2E1P51965 193 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 MZT1Q08AG7 82 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 SEC23BQ15437 767 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 METTL21CQ5VZV1 264 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 C11orf88Q6PI97 169 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 SMARCD3Q6STE5 483 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 CBLL1Q75N03 491 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 C11orf53Q8IXP5 236 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 BEND2Q8NDZ0 799 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 OR8S1Q8NH09 359 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 FANK1Q8TC84 345 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 CLPTM1LQ96KA5 538 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 MMP28Q9H239 520 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 INTS9Q9NV88 658 aaKnown RBP16.2■□□□□ 0.18
CCDC40-206ENST00000572083 GID8Q9NWU2 228 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 MRPL22Q9NWU5 206 aaKnown RBP16.2■□□□□ 0.18
CCDC40-206ENST00000572083 CMTM6Q9NX76 183 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 MAB21L2Q9Y586 359 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 N6AMT1Q9Y5N5 214 aa16.2■□□□□ 0.18
CCDC40-206ENST00000572083 TRBV4-1A0A0J9YWV2 114 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 CXCR6O00574 342 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 SERPINA1P01009 418 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 H1F0P07305 194 aaKnown RBP16.19■□□□□ 0.18
CCDC40-206ENST00000572083 SLC2A1P11166 492 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 PAX6P26367 422 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 GMFBP60983 142 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 KLF10Q13118 480 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 LRRC10Q5BKY1 277 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 WDR82Q6UXN9 313 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 ZBTB46Q86UZ6 589 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 SDR9C7Q8NEX9 313 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 OR4S1Q8NGB4 309 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 OR5T2Q8NGG2 359 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 ATP6V1G3Q96LB4 118 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 RNPEPL1Q9HAU8 725 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 ENPP4Q9Y6X5 453 aa16.19■□□□□ 0.18
CCDC40-206ENST00000572083 LOC100653049A0A140TA62 436 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 A0A1W2PRQ8 180 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 EDF1O60869 148 aaKnown RBP16.18■□□□□ 0.18
CCDC40-206ENST00000572083 KRT34O76011 436 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 TFF1P04155 84 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 VSIG8P0DPA2 414 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 AMY2BP19961 511 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 GRK5P34947 590 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 ACSM1Q08AH1 577 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 DGCR6Q14129 220 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 ZBTB37Q5TC79 503 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 C11orf87Q6NUJ2 197 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 DPY19L4Q7Z388 723 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 OR51G2Q8NGK0 314 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 C8orf46Q8TAG6 207 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 DMRTB1Q96MA1 342 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 SIKE1Q9BRV8 207 aa16.18■□□□□ 0.18
CCDC40-206ENST00000572083 OR6C68A6NDL8 312 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 GSTA4O15217 222 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 PSKH1P11801 424 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 OTX1P32242 354 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-206ENST00000572083 PRKXP51817 358 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 NCR3LG1Q68D85 454 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 STUMQ69YW2 141 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 DRAM2Q6UX65 266 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 OR1M1Q8NGA1 313 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 R3HDM4Q96D70 268 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 COPS4Q9BT78 406 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 OR52D1Q9H346 318 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 RANBP3Q9H6Z4 567 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-206ENST00000572083 PPP1R3EQ9H7J1 279 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 SNTG1Q9NSN8 517 aa16.17■□□□□ 0.18
CCDC40-206ENST00000572083 TENM3Q9P273 2699 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 A0A1W2PQ09 198 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 ANKRD30BLA7E2S9 258 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 CHST1O43916 411 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 FBXO24O75426 580 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 MPIG6BO95866 241 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 CD28P10747 220 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 ZNF823P16415 610 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 NOS3P29474 1203 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 SLC6A6P31641 620 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 TGM4P49221 684 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 LIPEQ05469 1076 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 MAPRE2Q15555 327 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 LRRC75BQ2VPJ9 315 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 FOXB2Q5VYV0 432 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 CRIP3Q6Q6R5 217 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 LYPD4Q6UWN0 246 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 OR52J3Q8NH60 311 aa16.16■□□□□ 0.18
CCDC40-206ENST00000572083 C12orf43Q96C57 262 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms