RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 FBP2O00757 339 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 SNX3O60493 162 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 BCAS1O75363 584 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 CTAG2O75638 210 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 MFN2O95140 757 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 OR6A2O95222 327 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 LGI1O95970 557 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 MT-ATP6P00846 226 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 C1QCP02747 245 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 COX4I1P13073 169 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 PRG2P13727 222 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 NQO1P15559 274 aaKnown RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 GGT1P19440 569 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 PSMB1P20618 241 aaKnown RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 IL32P24001 234 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 PRDX6P30041 224 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 MC5RP33032 325 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 ACAA2P42765 397 aaKnown RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 NUDT2P50583 147 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 RGS8P57771 180 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 MTPNP58546 118 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 SELENOWP63302 87 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 H3F3AP84243 136 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 GABPB1Q06547 395 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 ACSM1Q08AH1 577 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 RIGQ13278 110 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 C1DQ13901 141 aaKnown RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 CEACAM7Q14002 265 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 GUSBP1Q15486 140 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 MAPK11Q15759 364 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 C1orf140Q5VVS0 124 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 FBXW9Q5XUX1 488 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 REP15Q6BDI9 236 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 CGB2Q6NT52 195 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 TTC33Q6PID6 262 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 C6orf89Q6UWU4 347 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 HACD2Q6Y1H2 254 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 Q6ZT83 130 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 CCDC80Q76M96 950 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 ABHD12BQ7Z5M8 362 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 TUSC5Q8IXB3 177 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 C10orf53Q8N6V4 93 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 KLHDC1Q8N7A1 406 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 SMYD1Q8NB12 490 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 RELL2Q8NC24 303 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 MFSD8Q8NHS3 518 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 ABHD3Q8WU67 409 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 C10orf82Q8WW14 230 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 HIST1H2ACQ93077 130 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 POP5Q969H6 163 aaKnown RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 SLC38A4Q969I6 547 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 SLC25A36Q96CQ1 311 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 RCN3Q96D15 328 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 ARL5BQ96KC2 179 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 KCTD14Q9BQ13 255 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 SRXN1Q9BYN0 137 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 SLC19A3Q9BZV2 496 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 OR11A1Q9GZK7 315 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 POLR2J2Q9GZM3 115 aaKnown RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 POLR2J3Q9H1A7 115 aaKnown RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 OPN3Q9H1Y3 402 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 IKZF5Q9H5V7 419 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 COQ10BQ9H8M1 238 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 ARMCX1Q9P291 453 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 ELF5Q9UKW6 265 aaPredicted RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 CLEC4AQ9UMR7 237 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 RASD1Q9Y272 281 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 SH3GLB1Q9Y371 365 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 DNAJC13O75165 2243 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 DIDO1Q9BTC0 2240 aaKnown RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 ZNF407Q9C0G0 2248 aa3.24□□□□□ -1.89
NUP88-202ENST00000570937 PHF3Q92576 2039 aaKnown RBP3.24□□□□□ -1.89
NUP88-202ENST00000570937 HECTD1Q9ULT8 2610 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 DOPEY2Q9Y3R5 2298 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 TRAV36DV7A0A075B6V5 113 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 A0A087WUJ7 227 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 IGHV3-15A0A0B4J1V0 119 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 A0A0B4J2E0 115 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 LOC102725191A0A1B0GVB3 256 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 A0A1B0GWA3 101 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 A0A1B0GX12 115 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 CIB4A0PJX0 185 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 TRAPPC13A5PLN9 417 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 CCT8L1PA6NM43 557 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ZNF726A6NNF4 738 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 FAM220BPB1ANY3 271 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 CHP2O43745 196 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 TPST1O60507 370 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ENTPD5O75356 428 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 SRSF10O75494 262 aaKnown RBP3.23□□□□□ -1.89
NUP88-202ENST00000570937 AKR7A3O95154 331 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 STAMBPO95630 424 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ZNF682O95780 498 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 FAM107AO95990 144 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 IFNW1P05000 195 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 THRBP10828 461 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ACADSP16219 412 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ZNF43P17038 809 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 ACHEP22303 614 aa3.23□□□□□ -1.89
NUP88-202ENST00000570937 AHCYP23526 432 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms