RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 OPN1MWP04001 364 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 OPN1MW2P0DN77 364 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 OPN1MW3P0DN78 364 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 ZNF92Q03936 586 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 MICBQ29980 383 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 RFX4Q33E94 735 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 KPRPQ5T749 579 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-204ENST00000570902 ZNF826PQ6ZT77 177 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 LY6G5BQ8NDX9 201 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 FANK1Q8TC84 345 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 PYURFQ96I23 114 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 C7orf34Q96L11 122 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 NSMCE2Q96MF7 247 aa15.61■□□□□ 0.09
SCARF1-204ENST00000570902 RPRD1BQ9NQG5 326 aaKnown RBP15.61■□□□□ 0.09
SCARF1-204ENST00000570902 TET2Q6N021 2002 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-204ENST00000570902 BHLHE40O14503 412 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 ARPC2O15144 300 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 ARPC3O15145 178 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 GPR37O15354 613 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 PIN1P1O15428 100 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 PAHP00439 452 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 MUC1P15941 1255 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-204ENST00000570902 RHCEP18577 417 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 SLC6A6P31641 620 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 GRK5P34947 590 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 HERPUD1Q15011 391 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 SNAI3Q3KNW1 292 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 DRAM2Q6UX65 266 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 SLC36A1Q7Z2H8 476 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 OR4K13Q8NH42 304 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 OR52J3Q8NH60 311 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 OR2AE1Q8NHA4 323 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 SEMA6AQ9H2E6 1030 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 OPA3Q9H6K4 179 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 FBLN5Q9UBX5 448 aa15.6■□□□□ 0.09
SCARF1-204ENST00000570902 IGHV3OR15-7A0A075B7D8 119 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 NPFFO15130 113 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 T-ENOLP0DO92 83 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 HIST1H1CP16403 213 aaKnown RBP15.59■□□□□ 0.09
SCARF1-204ENST00000570902 ZNF823P16415 610 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 NOS3P29474 1203 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 GABRA5P31644 462 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 POU4F2Q12837 409 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 GLYATL3Q5SZD4 288 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 SAMD5Q5TGI4 173 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 SLC35E4Q6ICL7 350 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 C11orf88Q6PI97 169 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 OR4C15Q8NGM1 316 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 OR8S1Q8NH09 359 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 BCAS4Q8TDM0 211 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 MAP6Q96JE9 813 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 RNPEPL1Q9HAU8 725 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 SIRT7Q9NRC8 400 aa15.59■□□□□ 0.09
SCARF1-204ENST00000570902 TRBV4-1A0A0J9YWV2 114 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 RNASEK-C17orf49H0YIS7 233 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 CALB2P22676 271 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 SEC23BQ15437 767 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 PCK2Q16822 640 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 SPATS1Q496A3 300 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 Q6ZPA2 131 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 OR56B2PQ8NGI1 322 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 MCUR1Q96AQ8 359 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 C12orf43Q96C57 262 aaKnown RBP15.58■□□□□ 0.08
SCARF1-204ENST00000570902 CCL13Q99616 98 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 IFT27Q9BW83 186 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 PPA2Q9H2U2 334 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 OR52D1Q9H346 318 aa15.58■□□□□ 0.08
SCARF1-204ENST00000570902 OR6C68A6NDL8 312 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 ANKRD30BLA7E2S9 258 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 NDUFB3O43676 98 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 IDH3BO43837 385 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 OTX1P32242 354 aaPredicted RBP15.57■□□□□ 0.08
SCARF1-204ENST00000570902 DDOSTP39656 456 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 SPIBQ01892 262 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 FAM189A2Q15884 450 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 WDR38Q5JTN6 314 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 CYP2R1Q6VVX0 501 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 LNX2Q8N448 690 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 LRRC29Q8WV35 223 aa15.57■□□□□ 0.08
SCARF1-204ENST00000570902 MRPL22Q9NWU5 206 aaKnown RBP15.57■□□□□ 0.08
SCARF1-204ENST00000570902 PRPF19Q9UMS4 504 aaKnown RBP15.57■□□□□ 0.08
SCARF1-204ENST00000570902 A0A1B0GW55 424 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 MEIOCA2RUB1 952 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 SEMG1P04279 462 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 FABP3P05413 133 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 DUX4L2P0CJ85 424 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 DUX4L3P0CJ86 424 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 DUX4L4P0CJ87 422 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 DUX4L5P0CJ88 424 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 DUX4L6P0CJ89 424 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 DUX4L7P0CJ90 424 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 NAA10P41227 235 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-204ENST00000570902 DBPQ10586 325 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-204ENST00000570902 LRRC10Q5BKY1 277 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 NCR3LG1Q68D85 454 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 DUX4L9Q6RFH8 374 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-204ENST00000570902 FGFRL1Q8N441 504 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 SDR9C7Q8NEX9 313 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 PPP1R14AQ96A00 147 aa15.56■□□□□ 0.08
SCARF1-204ENST00000570902 DHRS1Q96LJ7 313 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms