RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 VPS29Q9UBQ0 182 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 MUTYHQ9UIF7 546 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 PSORS1C1Q9UIG5 152 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZNF391Q9UJN7 358 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 LSM4Q9Y4Z0 139 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 HSPB11Q9Y547 144 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 HSPE1-MOB4S4R3N1 261 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 TRIOO75962 3097 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 A0A096LPI6 279 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TRBV9A0A0B4J1U6 114 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 A0A1B0GTW7 788 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 MYOCOSA0A1B0GUC4 107 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 DHRS12A0PJE2 317 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ISPDA4D126 451 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TRABD2BA6NFA1 517 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 LRRC3CA6NJW4 275 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 EVPLLA8MZ36 301 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 FAM220BPB1ANY3 271 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 B4DGG1 531 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TMEM150CB9EJG8 249 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 F8VVB4 439 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 F8VWA3 439 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 H3BSA7 217 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 M0QZ24 198 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 PHYHO14832 338 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 CASKO14936 926 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TPST1O60507 370 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 CTSVO60911 334 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 FZD7O75084 574 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 LDB3O75112 727 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 DEAF1O75398 565 aaPredicted RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 RP2O75695 350 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR2B3O76000 313 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TMEM50AO95807 157 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TNFP01375 233 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 HLA-AP01891 365 aaKnown RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 MT-ND4P03905 459 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 THY1P04216 161 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 GAPDHP04406 335 aaKnown RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 IL3P08700 152 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 HOXC4P09017 264 aaPredicted RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 DBHP09172 617 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 H2AFB1P0C5Y9 115 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR10J4P0C629 311 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 C8orf88P0DMB2 117 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ZNF35P13682 527 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 UGT2B7P16662 529 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ENGP17813 658 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 GGT1P19440 569 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SERPINA2P20848 420 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 MPZP25189 248 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 PAX6P26367 422 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 CERS1P27544 350 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 HTR1EP28566 365 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR3A3P47888 321 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 CX3CR1P49238 355 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 DAP3P51398 398 aaKnown RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 EFNB2P52799 333 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 DLX5P56178 289 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR2B8PP59922 312 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SNRPEP62304 92 aaKnown RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 ZNF763Q0D2J5 394 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 C2orf80Q0P641 193 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SELENBP1Q13228 472 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 MAD2L1Q13257 205 aaPredicted RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 GPR18Q14330 331 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 MELKQ14680 651 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ZNF846Q147U1 533 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SF3A2Q15428 464 aaKnown RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 ZIC1Q15915 447 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 CYP51A1Q16850 503 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 DUOXA1Q1HG43 343 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 DEFB110Q30KQ9 67 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 RNF212Q495C1 297 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SLC35D3Q5M8T2 416 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 PRAMEF17Q5VTA0 474 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TMEM268Q5VZI3 342 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 NSUN5P2Q63ZY6 315 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TMEM42Q69YG0 159 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 GLYATQ6IB77 296 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR8G2PQ6IF36 304 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 FAM71E1Q6IPT2 247 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 FAM166AQ6J272 317 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 LPCAT3Q6P1A2 487 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ANKRD16Q6P6B7 361 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ZNF773Q6PK81 442 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OLIG3Q7RTU3 272 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ZNF367Q7RTV3 350 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SLC36A1Q7Z2H8 476 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR2W3Q7Z3T1 314 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 VN1R4Q7Z5H5 301 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 CCDC190Q86UF4 302 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 HAPLN4Q86UW8 402 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TMPRSS12Q86WS5 348 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 CALHM3Q86XJ0 350 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SVOPLQ8N434 492 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 DNAJC22Q8N4W6 341 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 WDSUB1Q8N9V3 476 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ZNF548Q8NEK5 533 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms