RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, human

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-222	ENST00000570086	SOX7	Q9BT81	388 aa		13.54	□□□□□ -0.24
CMC2-222	ENST00000570086	NAA50	Q9GZZ1	169 aa	Known RBP	13.54	□□□□□ -0.24
CMC2-222	ENST00000570086	ZNF442	Q9H7R0	627 aa		13.54	□□□□□ -0.24
CMC2-222	ENST00000570086	PLEKHA1	Q9HB21	404 aa		13.54	□□□□□ -0.24
CMC2-222	ENST00000570086	RNF115	Q9Y4L5	304 aa		13.54	□□□□□ -0.24
CMC2-222	ENST00000570086	PLCE1	Q9P212	2302 aa		13.54	□□□□□ -0.24
CMC2-222	ENST00000570086	USP9X	Q93008	2570 aa	Predicted RBP	13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	CCDC160	A6NGH7	325 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	GGT3P	A6NGU5	568 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	PRSS44	E7EML9	344 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086		H3BSH0	61 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	SIAH2	O43255	324 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	ZNF250	P15622	560 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	ZNF20	P17024	532 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	FST	P19883	344 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	LOX	P28300	417 aa	Predicted RBP	13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	GCH1	P30793	250 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	THBS4	P35443	961 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	SOX2	P48431	317 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	ERVS71-1	P61550	626 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	INSL4	Q14641	139 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	HLX	Q14774	488 aa	Predicted RBP	13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	DAZAP2	Q15038	168 aa	Predicted RBP	13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	C22orf42	Q6IC83	251 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	MEX3B	Q6ZN04	569 aa	Known RBP	13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	KRT74	Q7RTS7	529 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	SERPINA12	Q8IW75	414 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	FTMT	Q8N4E7	242 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	KLF14	Q8TD94	323 aa	Predicted RBP	13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	TMEM171	Q8WVE6	324 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	PP6455	Q8WZ26	134 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	ISOC1	Q96CN7	298 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	HAVCR1	Q96D42	359 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	DGCR14	Q96DF8	476 aa	Known RBP	13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	KCTD7	Q96MP8	289 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	TMEM204	Q9BSN7	226 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	CENPO	Q9BU64	300 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	NOX4	Q9NPH5	578 aa		13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	RSL24D1	Q9UHA3	163 aa	Known RBP	13.53	□□□□□ -0.24
CMC2-222	ENST00000570086	CD300LB	A8K4G0	201 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	VSTM5	A8MXK1	200 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	SHISA9	B4DS77	424 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	SLC22A1	O15245	554 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	KITLG	P21583	273 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	ACKR3	P25106	362 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	TNK1	Q13470	666 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	HSD17B12	Q53GQ0	312 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	SPATA46	Q5T0L3	261 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	ADAM5	Q6NVV9	412 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	OR56B2P	Q8NGI1	322 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	OR5D14	Q8NGL3	314 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	FGGY	Q96C11	551 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	CMBL	Q96DG6	245 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	CA10	Q9NS85	328 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	CKLF	Q9UBR5	152 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	KCNN3	Q9UGI6	736 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	POU2F3	Q9UKI9	436 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	FOXJ3	Q9UPW0	622 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	PIGL	Q9Y2B2	252 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	ATP23	Q9Y6H3	246 aa		13.52	□□□□□ -0.25
CMC2-222	ENST00000570086	TRAV1-2	A0A0B4J238	106 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	IQCF6	A8MYZ5	107 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086		H3BMQ9	156 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	PIN1P1	O15428	100 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	LMX1B	O60663	402 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	MYL9	P24844	172 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	CALR	P27797	417 aa	Known RBP	13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	MAGEB1	P43366	347 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	LSM3	P62310	102 aa	Known RBP	13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	PSG7	Q13046	419 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	UTS2B	Q765I0	119 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	KBTBD8	Q8NFY9	601 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	SYNPR	Q8TBG9	265 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	PIGT	Q969N2	578 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	ADAT3	Q96EY9	351 aa	Predicted RBP	13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	PIK3IP1	Q96FE7	263 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	CHST5	Q9GZS9	411 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	SLITRK2	Q9H156	845 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	PPIL3	Q9H2H8	161 aa	Known RBP	13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	CMAHP	Q9Y471	501 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	FLNC	Q14315	2725 aa		13.51	□□□□□ -0.25
CMC2-222	ENST00000570086	IGLV3-9	A0A075B6K5	115 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086		A0A1W2PPK0	400 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	ALX3	O95076	343 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	CST4	P01036	141 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	IGHV3-13	P01766	116 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	FAH	P16930	419 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	IGFBP3	P17936	291 aa	Predicted RBP	13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	SRM	P19623	302 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	GNAL	P38405	381 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	MPV17	P39210	176 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	MTNR1B	P49286	362 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	KLF3	P57682	345 aa	Predicted RBP	13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	SELENOV	P59797	346 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	VBP1	P61758	197 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	NCS1	P62166	190 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	CLVS2	Q5SYC1	327 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	FAM27D1	Q5T7N8	215 aa		13.5	□□□□□ -0.25
CMC2-222	ENST00000570086	TMEM42	Q69YG0	159 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms