RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 SNX5Q9Y5X3 404 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 CHD3Q12873 2000 aaKnown RBP10.84□□□□□ -0.67
CDT1-203ENST00000569140 A0A096LNT2 108 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 ACOD1A6NK06 481 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 H3BSH0 61 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 GMDSO60547 372 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 PNPP00491 289 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 HEXAP06865 529 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 GRPP07492 148 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 IRF2P14316 349 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 ZNF16P17020 682 aaPredicted RBP10.84□□□□□ -0.67
CDT1-203ENST00000569140 DCTDP32321 178 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 DDOSTP39656 456 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 PSMB10P40306 273 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 SMN1Q16637 294 aaKnown RBP10.84□□□□□ -0.67
CDT1-203ENST00000569140 KCTD8Q6ZWB6 473 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 THAP5Q7Z6K1 395 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 CSNK2A3Q8NEV1 391 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 APH1BQ8WW43 257 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 PIGCQ92535 297 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 PPP1R14AQ96A00 147 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 MRPL48Q96GC5 212 aaKnown RBP10.84□□□□□ -0.67
CDT1-203ENST00000569140 LYZL4Q96KX0 146 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 SIGLEC11Q96RL6 698 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 GAL3ST1Q99999 423 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 SOX7Q9BT81 388 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 VCX3BQ9H321 246 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 GPR84Q9NQS5 396 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 YAE1D1Q9NRH1 226 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 TMEM106BQ9NUM4 274 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 ACOXLQ9NUZ1 547 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 DCAF16Q9NXF7 216 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 UBAP1Q9NZ09 502 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 ZNF391Q9UJN7 358 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 WIPI2Q9Y4P8 454 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 ITPR3Q14573 2671 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 CR1P17927 2039 aa10.84□□□□□ -0.67
CDT1-203ENST00000569140 hCG_1807616A0A1W2PRN6 198 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 LRRC30A6NM36 301 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 ANXA2P2A6NMY6 339 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 ZNF850A8MQ14 1090 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 J3QLW9 94 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 P2RY10O00398 339 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 WNT9BO14905 357 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 FADS2O95864 444 aaKnown RBP10.83□□□□□ -0.68
CDT1-203ENST00000569140 CYB5R3P00387 301 aaPredicted RBP10.83□□□□□ -0.68
CDT1-203ENST00000569140 ZNF19P17023 458 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 IL2RGP31785 369 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 MAP2K3P46734 347 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 MMP16P51512 607 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 MZT1Q08AG7 82 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 IL18R1Q13478 541 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 SNCBQ16143 134 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 LIPNQ5VXI9 398 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 LHFPL3Q86UP9 236 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 ACBD7Q8N6N7 88 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 BOLLQ8N9W6 283 aaKnown RBP10.83□□□□□ -0.68
CDT1-203ENST00000569140 OR11L1Q8NGX0 322 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 CLDND2Q8NHS1 167 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 NRG4Q8WWG1 115 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 ALG8Q9BVK2 526 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 GCM1Q9NP62 436 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 C14orf119Q9NWQ9 140 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 NUFIP1Q9UHK0 495 aaKnown RBP10.83□□□□□ -0.68
CDT1-203ENST00000569140 SLC22A13Q9Y226 551 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 EXOGQ9Y2C4 368 aaKnown RBP10.83□□□□□ -0.68
CDT1-203ENST00000569140 RHBDD3Q9Y3P4 386 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 NPTNQ9Y639 398 aa10.83□□□□□ -0.68
CDT1-203ENST00000569140 MED13LQ71F56 2210 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 A0A0U1RQV5 110 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 A0A1B0GVI7 797 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 H0YAE9 185 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 CD5LO43866 347 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 WBP4O75554 376 aaKnown RBP10.82□□□□□ -0.68
CDT1-203ENST00000569140 MTRF1O75570 445 aaKnown RBP10.82□□□□□ -0.68
CDT1-203ENST00000569140 SULT1C4O75897 302 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 ZNF205O95201 554 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 TTRP02766 147 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 GNAO1P09471 354 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 TACSTD2P09758 323 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 IGHV4-31P0DP07 118 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 ACKR3P25106 362 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 CD200P41217 278 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 GZMKP49863 264 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 AQP4P55087 323 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 ACTA2P62736 377 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 ACTG2P63267 376 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 ADARB1P78563 741 aaKnown RBP10.82□□□□□ -0.68
CDT1-203ENST00000569140 RAB40BQ12829 278 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 PRDX4Q13162 271 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 OR8B8Q15620 311 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 KLHL22Q53GT1 634 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 C6orf52Q5T4I8 152 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 CYB5R2Q6BCY4 276 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 SEMA6DQ8NFY4 1073 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 OR52I1Q8NGK6 324 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 HPS1Q92902 700 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 C4orf36Q96KX1 117 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 HIST1H2AAQ96QV6 131 aa10.82□□□□□ -0.68
CDT1-203ENST00000569140 MYCBPQ99417 103 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms