RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ADCK1Q86TW2 530 aa7□□□□□ -1.29
SMG1-216ENST00000569122 TSPYL5Q86VY4 417 aaPredicted RBP7□□□□□ -1.29
SMG1-216ENST00000569122 RNF113BQ8IZP6 322 aaKnown RBP7□□□□□ -1.29
SMG1-216ENST00000569122 FAM216BQ8N7L0 139 aa7□□□□□ -1.29
SMG1-216ENST00000569122 CYB561A3Q8NBI2 242 aa7□□□□□ -1.29
SMG1-216ENST00000569122 PIFOQ8TCI5 191 aa7□□□□□ -1.29
SMG1-216ENST00000569122 CAPSLQ8WWF8 208 aa7□□□□□ -1.29
SMG1-216ENST00000569122 MALSU1Q96EH3 234 aa7□□□□□ -1.29
SMG1-216ENST00000569122 AKR1E2Q96JD6 320 aa7□□□□□ -1.29
SMG1-216ENST00000569122 ATF6BQ99941 703 aa7□□□□□ -1.29
SMG1-216ENST00000569122 PAIP2Q9BPZ3 127 aaKnown RBP7□□□□□ -1.29
SMG1-216ENST00000569122 HAO2Q9NYQ3 351 aa7□□□□□ -1.29
SMG1-216ENST00000569122 TRAV27A0A087WT01 109 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 A6NDX4 124 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 RGS16O15492 202 aaPredicted RBP6.99□□□□□ -1.29
SMG1-216ENST00000569122 AZGP1P25311 298 aaKnown RBP6.99□□□□□ -1.29
SMG1-216ENST00000569122 CHATP28329 748 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 MDH1P40925 334 aaKnown RBP6.99□□□□□ -1.29
SMG1-216ENST00000569122 DLX1P56177 255 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 HOXA4Q00056 320 aaPredicted RBP6.99□□□□□ -1.29
SMG1-216ENST00000569122 TRAP1Q12931 704 aaKnown RBP6.99□□□□□ -1.29
SMG1-216ENST00000569122 RSPO1Q2MKA7 263 aaPredicted RBP6.99□□□□□ -1.29
SMG1-216ENST00000569122 MESTQ5EB52 335 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 PAGE3Q5JUK9 113 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 STUMQ69YW2 141 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 CCDC80Q76M96 950 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 RRM2BQ7LG56 351 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 LINC00482Q8N8I6 264 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 OR4C15Q8NGM1 316 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 OR5K1Q8NHB7 308 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 C17orf50Q8WW18 174 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 MYDGFQ969H8 173 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 TAMM41Q96BW9 452 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 Q96M85 177 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 TMEM109Q9BVC6 243 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 SYT4Q9H2B2 425 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 RABEP2Q9H5N1 569 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 IKZF5Q9H5V7 419 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 KCNK9Q9NPC2 374 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 VSX1Q9NZR4 365 aaPredicted RBP6.99□□□□□ -1.29
SMG1-216ENST00000569122 CCDC167Q9P0B6 97 aa6.99□□□□□ -1.29
SMG1-216ENST00000569122 TBL2Q9Y4P3 447 aaKnown RBP6.99□□□□□ -1.29
SMG1-216ENST00000569122 FAM90A8PA6NJQ4 464 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 H0YHG0 523 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 M0R135 149 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 SIGLEC5O15389 551 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 SNNO75324 88 aaPredicted RBP6.98□□□□□ -1.29
SMG1-216ENST00000569122 GNALP38405 381 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 DYNLT3P51808 116 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 SLC7A2P52569 658 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 ERVFRD-1P60508 538 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 ZNF92Q03936 586 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 PRKCDQ05655 676 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 KRR1Q13601 381 aaKnown RBP6.98□□□□□ -1.29
SMG1-216ENST00000569122 ZBED5Q49AG3 693 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 KHDC1LQ5JSQ8 128 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 HCP5Q6MZN7 132 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 DRAM2Q6UX65 266 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 WDR82Q6UXN9 313 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 ZNF788Q6ZQV5 615 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 C16orf82Q7Z2V1 217 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 FAM122BQ7Z309 247 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 FGFRL1Q8N441 504 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 FTMTQ8N4E7 242 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 OR1M1Q8NGA1 313 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 OR52H1Q8NGJ2 320 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 OR10Z1Q8NGY1 313 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 ZNF799Q96GE5 643 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 OR52B2Q96RD2 323 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 SP140LQ9H930 580 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 KCNG2Q9UJ96 466 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 ZNF391Q9UJN7 358 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 A4GNTQ9UNA3 340 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 ADAM18Q9Y3Q7 739 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 LSM4Q9Y4Z0 139 aaKnown RBP6.98□□□□□ -1.29
SMG1-216ENST00000569122 LHFPL6Q9Y693 200 aa6.98□□□□□ -1.29
SMG1-216ENST00000569122 DYNC2H1Q8NCM8 4307 aaKnown RBP6.97□□□□□ -1.29
SMG1-216ENST00000569122 A0A1B0GW55 424 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 XRCC2O43543 280 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 RHBDL1O75783 438 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 NDUFB2O95178 105 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 ACAA1P09110 424 aaPredicted RBP6.97□□□□□ -1.29
SMG1-216ENST00000569122 DUX4L2P0CJ85 424 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 DUX4L3P0CJ86 424 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 DUX4L4P0CJ87 422 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 DUX4L5P0CJ88 424 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 DUX4L6P0CJ89 424 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 DUX4L7P0CJ90 424 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 CFL1P23528 166 aaKnown RBP6.97□□□□□ -1.29
SMG1-216ENST00000569122 RPS6KA3P51812 740 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 SLC25A1P53007 311 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 OR12D2P58182 307 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 BLCAPP62952 87 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 IL5RAQ01344 420 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 MPP2Q14168 576 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 TRAM2Q15035 370 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 VMACQ2NL98 169 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 RFX4Q33E94 735 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 KRT71Q3SY84 523 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 NKAPLQ5M9Q1 402 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms