RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 GRPEL1Q9HAV7 217 aa4.6□□□□□ -1.67
CDH13-211ENST00000568770 ZNF229Q9UJW7 825 aa4.6□□□□□ -1.67
CDH13-211ENST00000568770 VPREB3Q9UKI3 123 aa4.6□□□□□ -1.67
CDH13-211ENST00000568770 FOXJ3Q9UPW0 622 aa4.6□□□□□ -1.67
CDH13-211ENST00000568770 SIGLEC9Q9Y336 463 aa4.6□□□□□ -1.67
CDH13-211ENST00000568770 STARD10Q9Y365 291 aa4.6□□□□□ -1.67
CDH13-211ENST00000568770 FAM96BQ9Y3D0 163 aa4.6□□□□□ -1.67
CDH13-211ENST00000568770 USH1CQ9Y6N9 552 aa4.6□□□□□ -1.67
CDH13-211ENST00000568770 WDR91A4D1P6 747 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 BTBD17A6NE02 478 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 ANKRD61A6NGH8 418 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 LRRC30A6NM36 301 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 CPSF4LA6NMK7 179 aaKnown RBP4.59□□□□□ -1.67
CDH13-211ENST00000568770 CENPBD1B2RD01 187 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 F5H5P2 479 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 K7EIL1 84 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 CHP2O43745 196 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 FMO6PO60774 539 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 SLC22A3O75751 556 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 THY1P04216 161 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 LIPFP07098 398 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 CST2P09228 141 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 TUBG1P23258 451 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 PMELP40967 661 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 PCP4P48539 62 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 SRP9P49458 86 aaKnown RBP4.59□□□□□ -1.67
CDH13-211ENST00000568770 NPY4RP50391 375 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 UGT2B15P54855 530 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 PCBD1P61457 104 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 ZNF91Q05481 1191 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 RPL18Q07020 188 aaKnown RBP4.59□□□□□ -1.67
CDH13-211ENST00000568770 SRSF7Q16629 238 aaKnown RBP eCLIP4.59□□□□□ -1.67
CDH13-211ENST00000568770 ZNF181Q2M3W8 571 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 DEFB121Q5J5C9 76 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 C6orf10Q5SRN2 563 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 ARMC4Q5T2S8 1044 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 HHATQ5VTY9 493 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 REEP3Q6NUK4 255 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 ZNF613Q6PF04 617 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 TTC33Q6PID6 262 aaPredicted RBP4.59□□□□□ -1.67
CDH13-211ENST00000568770 C1orf122Q6ZSJ8 110 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 NANOGNBQ7Z5D8 188 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 C1orf87Q8N0U7 546 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 C2CD4CQ8TF44 421 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 STAB2Q8WWQ8 2551 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 RYR2Q92736 4967 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 HDAC2Q92769 488 aaKnown RBP4.59□□□□□ -1.67
CDH13-211ENST00000568770 HAVCR1Q96D42 359 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 ITCHQ96J02 903 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 SORT1Q99523 831 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 MMP28Q9H239 520 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 SEMA6AQ9H2E6 1030 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 PPA2Q9H2U2 334 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 MMADHCQ9H3L0 296 aaPredicted RBP4.59□□□□□ -1.67
CDH13-211ENST00000568770 SLCO1B3Q9NPD5 702 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 TUBG2Q9NRH3 451 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 ZNRD1Q9P1U0 126 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 CTSZQ9UBR2 303 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 SLC13A4Q9UKG4 626 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 TMCC3Q9ULS5 477 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 RAP2CQ9Y3L5 183 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 TIMM10BQ9Y5J6 103 aa4.59□□□□□ -1.67
CDH13-211ENST00000568770 DYNC2H1Q8NCM8 4307 aaKnown RBP4.58□□□□□ -1.68
CDH13-211ENST00000568770 ELOVL7A1L3X0 281 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 CXorf65A6NEN9 183 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 PRORSD1PA6NEY8 169 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 RNASEK-C17orf49H0YIS7 233 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 MLNRO43193 412 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 LYPD3O95274 346 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 HLA-DPB1P04440 258 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 SERPINE1P05121 402 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 FBP1P09467 338 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 IRF2P14316 349 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 AQP1P29972 269 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 AQP2P41181 271 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 SLC1A6P48664 564 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 DAP3P51398 398 aaKnown RBP4.58□□□□□ -1.68
CDH13-211ENST00000568770 EFNB2P52799 333 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 ARF6P62330 175 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 CD47Q08722 323 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 FADDQ13158 208 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 ENDOGQ14249 297 aaKnown RBP4.58□□□□□ -1.68
CDH13-211ENST00000568770 NPTX1Q15818 432 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 NSUN5P1Q3KNT7 163 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 ENTPD8Q5MY95 495 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 GCNT6Q5T4J0 391 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 C1orf94Q6P1W5 598 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 SLC25A47Q6Q0C1 308 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 HDDC2Q7Z4H3 204 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 VMO1Q7Z5L0 202 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 ARMC8Q8IUR7 673 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 C10orf111Q8N326 155 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 KLHDC1Q8N7A1 406 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 TMEM217Q8N7C4 229 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 CLDN22Q8N7P3 220 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 OR8G5Q8NG78 346 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 OR4S1Q8NGB4 309 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 OR13G1Q8NGZ3 307 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 SLC7A6Q92536 515 aa4.58□□□□□ -1.68
CDH13-211ENST00000568770 PTP4A1Q93096 173 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms