RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ADAT1Q9BUB4 502 aaKnown RBP10.37□□□□□ -0.75
SF3B3-208ENST00000567250 ABCB9Q9NP78 766 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 TMEM100Q9NV29 134 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 PSORS1C1Q9UIG5 152 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 TPRKBQ9Y3C4 175 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 LOC390937A0A1W2PQ73 354 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 J3QLW9 94 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 MAGEB4O15481 346 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-208ENST00000567250 XPNPEP2O43895 674 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 GMDSO60547 372 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 DHRS3O75911 302 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 TTRP02766 147 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 CCDC159P0C7I6 412 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 ZNF12P17014 697 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 ZNF19P17023 458 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 MAGEB1P43366 347 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 MAP2K3P46734 347 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 SRP9P49458 86 aaKnown RBP10.36□□□□□ -0.75
SF3B3-208ENST00000567250 GBX2P52951 348 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-208ENST00000567250 OR12D2P58182 307 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 CCL8P80075 99 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 ST3GAL4Q11206 333 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 C6orf141Q5SZD1 244 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 CATSPERDQ86XM0 798 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 ELMOD2Q8IZ81 293 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 ZCCHC24Q8N2G6 241 aaKnown RBP10.36□□□□□ -0.75
SF3B3-208ENST00000567250 ZNF525Q8N782 197 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 SPERTQ8NA61 448 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 UBASH3BQ8TF42 649 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 MYDGFQ969H8 173 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 PIMREGQ9BSJ6 248 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 PAPOLGQ9BWT3 736 aaKnown RBP10.36□□□□□ -0.75
SF3B3-208ENST00000567250 PLEKHA1Q9HB21 404 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 G6PC2Q9NQR9 355 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 GPR84Q9NQS5 396 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 DLL4Q9NR61 685 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 ZNF319Q9P2F9 582 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 IL19Q9UHD0 177 aa10.36□□□□□ -0.75
SF3B3-208ENST00000567250 CAB39Q9Y376 341 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-208ENST00000567250 ITPR3Q14573 2671 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 CELSR1Q9NYQ6 3014 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 IGHV1-69-2A0A0G2JMI3 117 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 A0A1B0GVI7 797 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 C5orf63A6NC05 138 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 ANXA2P2A6NMY6 339 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 DHRS7CA6NNS2 312 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 NCR1O76036 304 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 PNPP00491 289 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 IGLV3-1P01715 115 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 LIMS3P0CW19 117 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 LIMS4P0CW20 117 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 SLC25A16P16260 332 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 ACHEP22303 614 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 ANOS1P23352 680 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 GSK3AP49840 483 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 CCR9P51686 369 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 SLC3A1Q07837 685 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 OR8G1Q15617 311 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 CARTPTQ16568 116 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 TSTQ16762 297 aaKnown RBP10.35□□□□□ -0.75
SF3B3-208ENST00000567250 HFEQ30201 348 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 ZBTB37Q5TC79 503 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 FDX2Q6P4F2 183 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 Q6ZR03 302 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 DOK3Q7L591 496 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 KRTAP1-3Q8IUG1 177 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 ZNF786Q8N393 782 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 CELF2-AS1Q8N7Q2 184 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 SEMA6DQ8NFY4 1073 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 OR10AD1Q8NGE0 317 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 OR8S1Q8NH09 359 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 OR52N1Q8NH53 320 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 OR51E1Q8TCB6 317 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 GTF3AQ92664 365 aaKnown RBP10.35□□□□□ -0.75
SF3B3-208ENST00000567250 RORBQ92753 470 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 RDH5Q92781 318 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 GGHQ92820 318 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 PELI1Q96FA3 418 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 FAM71F1Q96KD3 344 aaPredicted RBP10.35□□□□□ -0.75
SF3B3-208ENST00000567250 Q96MF0 132 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 COMMD4Q9H0A8 199 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 CHODLQ9H9P2 273 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 TRIM36Q9NQ86 728 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 MPC1Q9Y5U8 109 aa10.35□□□□□ -0.75
SF3B3-208ENST00000567250 ZNF816-ZNF321PA0A0X1KG74 233 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 A0A1B0GWJ7 208 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 IFNL4K9M1U5 179 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 MLNRO43193 412 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 LY6HO94772 140 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 HPXP02790 462 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 CA6P23280 308 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 PSMB10P40306 273 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 CRYBB2P43320 205 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 TAS2R43P59537 309 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 CCDC58Q4VC31 144 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 WDR38Q5JTN6 314 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 RBM48Q5RL73 367 aaKnown RBP10.34□□□□□ -0.75
SF3B3-208ENST00000567250 TMEM244Q5VVB8 128 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 DNM1P46Q6ZS02 220 aa10.34□□□□□ -0.75
SF3B3-208ENST00000567250 TGIF2LYQ8IUE0 185 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms