RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 STX4Q12846 297 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PTK6Q13882 451 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FAM53BQ14153 422 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SLMAPQ14BN4 828 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 MORF4L2Q15014 288 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TMED2Q15363 201 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TSC22D1Q15714 1073 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 AANATQ16613 207 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CLPPQ16740 277 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 CYP51A1Q16850 503 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 NDUFAF6Q330K2 333 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 GPAT3Q53EU6 434 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CMPK2Q5EBM0 449 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PIGGQ5H8A4 983 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SPANXN3Q5MJ09 141 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 STEAP4Q687X5 459 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CLEC6AQ6EIG7 209 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SLC25A25Q6KCM7 469 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 H3F3CQ6NXT2 135 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CD164L2Q6UWJ8 174 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TMIGD1Q6UXZ0 262 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 UNC5DQ6UXZ4 953 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ZCCHC23Q6ZST2 131 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FAM47EQ6ZV65 393 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 GOLGA7Q7Z5G4 137 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 LUZP2Q86TE4 346 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 MARCH3Q86UD3 253 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 LRRC6Q86X45 466 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 RAB43Q86YS6 212 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 C10orf107Q8IVU9 208 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CNTN4Q8IWV2 1026 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CENPLQ8N0S6 344 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 IQCKQ8N0W5 287 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PDIK1LQ8N165 341 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TMEM156Q8N614 296 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TMEM251Q8N6I4 163 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CCNYL1Q8N7R7 359 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ACOT4Q8N9L9 421 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TTC29Q8NA56 475 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 APCDD1LQ8NCL9 501 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ST6GALNAC3Q8NDV1 305 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PLPP5Q8NEB5 264 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ATP6V1C2Q8NEY4 427 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 OR7G3Q8NG95 312 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 OR10G3Q8NGC4 313 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CLHC1Q8NHS4 586 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CDC26Q8NHZ8 85 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 M1APQ8TC57 530 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 AGR3Q8TD06 166 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 DCAKDQ8WVC6 231 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SLC5A11Q8WWX8 675 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ATP6V1E2Q96A05 226 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FAM46BQ96A09 425 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FAM162AQ96A26 154 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CIDECQ96AQ7 238 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 EXOSC8Q96B26 276 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 EFHD2Q96C19 240 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 TRIM44Q96DX7 344 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 CERS2Q96G23 380 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PPP1R36Q96LQ0 422 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CATSPER2Q96P56 530 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PANX3Q96QZ0 392 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 NAPGQ99747 312 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 AIF1LQ9BQI0 150 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 UTP23Q9BRU9 249 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 C1QTNF6Q9BXI9 259 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ERVK-6Q9BXR3 956 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 EBPLQ9BY08 206 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ZNF717Q9BY31 904 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 TTTY12Q9BZ98 90 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 C20orf27Q9GZN8 174 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CHRNA10Q9GZZ6 450 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 RPF2Q9H7B2 306 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 SRD5A3Q9H8P0 318 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 WDR54Q9H977 334 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FANCEQ9HB96 536 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FOLH1BQ9HBA9 442 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 EML4Q9HC35 981 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 MRM3Q9HC36 420 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 ANKHQ9HCJ1 492 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 PRTFDC1Q9NRG1 225 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 NINJ2Q9NZG7 142 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CNIH4Q9P003 139 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 MED11Q9P086 117 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 TMEM216Q9P0N5 145 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 C6orf203Q9P0P8 240 aaPredicted RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 SEC14L3Q9UDX4 400 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 NUFIP1Q9UHK0 495 aaKnown RBP0.91□□□□□ -2.26
SMG1-212ENST00000566328 BCAP29Q9UHQ4 241 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FZR1Q9UM11 496 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 CLEC4AQ9UMR7 237 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 LIPT1Q9Y234 373 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 RNF6Q9Y252 685 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 KLHDC2Q9Y2U9 406 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ACOT9Q9Y305 439 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 MEMO1Q9Y316 297 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 FIS1Q9Y3D6 152 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 ZNF337Q9Y3M9 751 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 RFNGQ9Y644 331 aa0.91□□□□□ -2.26
SMG1-212ENST00000566328 SLC22A7Q9Y694 548 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms