RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ZNF511Q8NB15 262 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 OR9Q1Q8NGQ5 310 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 OR2T4Q8NH00 348 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 SSMEM1Q8WWF3 244 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 GATAD2BQ8WXI9 593 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 DYRK2Q92630 601 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 LHX4Q969G2 390 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 MCUR1Q96AQ8 359 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 SGK3Q96BR1 496 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 SLAMF6Q96DU3 332 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 NSMCE2Q96MF7 247 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 TRIM15Q9C019 465 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 PPP1R3EQ9H7J1 279 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 CNTD2Q9H8S5 307 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 TRIM36Q9NQ86 728 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 CENPMQ9NSP4 180 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 ZNF319Q9P2F9 582 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 RPUSD1Q9UJJ7 312 aaKnown RBP7.08□□□□□ -1.28
CAPN3-213ENST00000565173 LYVE1Q9Y5Y7 322 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 CDH10Q9Y6N8 788 aa7.08□□□□□ -1.28
CAPN3-213ENST00000565173 IGHV3OR15-7A0A075B7D8 119 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 A0A1B0GW55 424 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 ECDO95905 644 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-213ENST00000565173 CRYBA1P05813 215 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 GYPBP06028 91 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 DUX4L2P0CJ85 424 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 DUX4L3P0CJ86 424 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 DUX4L4P0CJ87 422 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 DUX4L5P0CJ88 424 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 DUX4L6P0CJ89 424 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 DUX4L7P0CJ90 424 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 SPI1P17947 270 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 AMY2BP19961 511 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 FMO3P31513 532 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 DDOSTP39656 456 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 MAGEA2P43356 314 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 IER3P46695 156 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 ENTPD1P49961 510 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 MNAT1P51948 309 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 SLC25A1P53007 311 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 RPL15P61313 204 aaKnown RBP7.07□□□□□ -1.28
CAPN3-213ENST00000565173 CRMP1Q14194 572 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 CDONQ4KMG0 1287 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 MIDNQ504T8 468 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 KLHL12Q53G59 568 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 SAMD4BQ5PRF9 694 aaKnown RBP7.07□□□□□ -1.28
CAPN3-213ENST00000565173 LINC01590Q5TEZ4 76 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 METTL11BQ5VVY1 283 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 ASPHD2Q6ICH7 369 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 RPL13AP3Q6NVV1 102 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 DUX4L9Q6RFH8 374 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-213ENST00000565173 WDR82Q6UXN9 313 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 C17orf107Q6ZR85 190 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 RASSF6Q6ZTQ3 369 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 SLC16A9Q7RTY1 509 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 TRPM8Q7Z2W7 1104 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 LDLRAD3Q86YD5 345 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 OR52L1Q8NGH7 329 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 OR4Q3Q8NH05 313 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 LINC01006Q8NI28 216 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 TBC1D15Q8TC07 691 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 SEH1LQ96EE3 360 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 NSL1Q96IY1 281 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 COPS4Q9BT78 406 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 TLNRD1Q9H1K6 362 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 OPA3Q9H6K4 179 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 RNPEPL1Q9HAU8 725 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 C14orf119Q9NWQ9 140 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 DUX4Q9UBX2 424 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 N6AMT1Q9Y5N5 214 aa7.07□□□□□ -1.28
CAPN3-213ENST00000565173 hCG_1807616A0A1W2PRN6 198 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 TCRBV5S2A0A599 114 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 DHRS12A0PJE2 317 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 A6NLC8 198 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 B2RBV5 119 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 ZNF878C9JN71 531 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 TNFRSF11BO00300 401 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 ACOT8O14734 319 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 XRCC2O43543 280 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 GPR137BO60478 399 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 CLPXO76031 633 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 SPARCP09486 303 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 MUC1P15941 1255 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-213ENST00000565173 CALB2P22676 271 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 TGM4P49221 684 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 CX3CR1P49238 355 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 GSK3AP49840 483 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 PROK1P58294 105 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 CSNK2BP67870 215 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 CBX1P83916 185 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 MZT1Q08AG7 82 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 PPP1R8Q12972 351 aaKnown RBP7.06□□□□□ -1.28
CAPN3-213ENST00000565173 SPATS1Q496A3 300 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 WDR38Q5JTN6 314 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 ATPAF1Q5TC12 328 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-213ENST00000565173 BRICD5Q6PL45 260 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 C16orf89Q6UX73 402 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 VMO1Q7Z5L0 202 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 PDZD9Q8IXQ8 264 aa7.06□□□□□ -1.28
CAPN3-213ENST00000565173 LINC00471Q8N535 108 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms