RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 THEM6Q8WUY1 208 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 RNF133Q8WVZ7 376 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 AMELYQ99218 206 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 ADAT1Q9BUB4 502 aaKnown RBP11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 YIPF3Q9GZM5 350 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 DCLRE1BQ9H816 532 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 MMP26Q9NRE1 261 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 LRRC30A6NM36 301 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 CEACAM18A8MTB9 384 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 DLGAP1O14490 977 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 CASQ2O14958 399 aaPredicted RBP11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 SLC16A6O15403 523 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 FAM20BO75063 409 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 H2BFMP0C1H6 154 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 ALOX5APP20292 161 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 EPHA1P21709 976 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 PEX2P28328 305 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 THBS2P35442 1172 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 OPRL1P41146 370 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 SLC15A1P46059 708 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 SNRPGP62308 76 aaKnown RBP11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 GRB2P62993 217 aaKnown RBP11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 MPPED2Q15777 294 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 TIGD6Q17RP2 521 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 TMEM155Q4W5P6 130 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 ESCO2Q56NI9 601 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 SLC25A30Q5SVS4 291 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 LPCAT4Q643R3 524 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 MUC20Q8N307 709 aaPredicted RBP11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 PACRGLQ8N7B6 248 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 OR56B2PQ8NGI1 322 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 OR11L1Q8NGX0 322 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 C22orf15Q8WYQ4 148 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 UBE2FQ969M7 185 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 FAM118AQ9NWS6 357 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 IMPAD1Q9NX62 359 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 SMPD3Q9NY59 655 aaPredicted RBP11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 WARS2Q9UGM6 360 aaKnown RBP11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 KLHDC2Q9Y2U9 406 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 GMPPBQ9Y5P6 360 aa11.44□□□□□ -0.58
VPS9D1-204ENST00000565023 PPIAL4EA0A075B759 164 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 LOC100130705A0A1B0GUX0 176 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 A6NLC8 198 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 PPIAL4DF5H284 164 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 TRAPPC2LH3BP13 241 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 VENTXO95231 258 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 GRPP07492 148 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 LYNP07948 512 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 MRPL3P09001 348 aaKnown RBP11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 PPIAL4FP0DN26 164 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 HTR1FP30939 366 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 CD80P33681 288 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 HCCSP53701 268 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 ZNF121P58317 390 aaPredicted RBP11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 TMED1Q13445 227 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 LRRC36Q1X8D7 754 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 OGFRL1Q5TC84 451 aaPredicted RBP11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 C1orf87Q8N0U7 546 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 GALNT4Q8N4A0 578 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 REEP6Q96HR9 211 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 PGAM5Q96HS1 289 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 CNN2Q99439 309 aaKnown RBP11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 TMEM246Q9BRR3 403 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 TTTY10Q9BZA0 68 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 ADGRL4Q9HBW9 690 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 TMEM165Q9HC07 324 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 LAMP5Q9UJQ1 280 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 PPIAL4AQ9Y536 164 aa11.43□□□□□ -0.58
VPS9D1-204ENST00000565023 hCG_1807616A0A1W2PRN6 198 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 F5H0A9 414 aaPredicted RBP11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 J3QLI3 93 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 IFNL4K9M1U5 179 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 XRCC2O43543 280 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 GABRB1P18505 474 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 CD200P41217 278 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 GNB2P62879 340 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 OCLNQ16625 522 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 SFRP4Q6FHJ7 346 aaPredicted RBP11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 LYPD2Q6UXB3 125 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 LRRN1Q6UXK5 716 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 ZNF826PQ6ZT77 177 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 C1QL2Q7Z5L3 287 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 KLBQ86Z14 1044 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 RFKQ969G6 155 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 MNTQ99583 582 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 NKX1-2Q9UD57 310 aaPredicted RBP11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 OR5V1Q9UGF6 321 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 TMEM14AQ9Y6G1 99 aa11.42□□□□□ -0.58
VPS9D1-204ENST00000565023 IGHV3OR16-10A0A075B7F0 116 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 ANKRD30BLA7E2S9 258 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 PSMD9O00233 223 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 ENTPD6O75354 484 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 APOC1P02654 83 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 WNT2P09544 360 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 ROM1Q03395 351 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 SLC34A1Q06495 639 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 POU4F2Q12837 409 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 OR8B8Q15620 311 aa11.41□□□□□ -0.58
VPS9D1-204ENST00000565023 MEDAGQ5VYS4 303 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms