RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 REEP6Q96HR9 211 aa9.57□□□□□ -0.88
SF3B3-205ENST00000564899 LYZL4Q96KX0 146 aa9.57□□□□□ -0.88
SF3B3-205ENST00000564899 DERL3Q96Q80 235 aa9.57□□□□□ -0.88
SF3B3-205ENST00000564899 OR51B6Q9H340 312 aa9.57□□□□□ -0.88
SF3B3-205ENST00000564899 RGCCQ9H4X1 137 aa9.57□□□□□ -0.88
SF3B3-205ENST00000564899 NOX4Q9NPH5 578 aa9.57□□□□□ -0.88
SF3B3-205ENST00000564899 TBCCD1Q9NVR7 557 aa9.57□□□□□ -0.88
SF3B3-205ENST00000564899 ZNF391Q9UJN7 358 aa9.57□□□□□ -0.88
SF3B3-205ENST00000564899 FN1P02751 2386 aaKnown RBP9.57□□□□□ -0.88
SF3B3-205ENST00000564899 TRBV5-7A0A0A0MS05 114 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 IGHV2OR16-5A0A0B4J2B6 119 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 A0A1W2PPK0 400 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 J3QW42 95 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 SMPD2O60906 423 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 ARL6IP5O75915 188 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 NGFP01138 241 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 IGLV3-1P01715 115 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 CD2P06729 351 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 THBDP07204 575 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 UCHL1P09936 223 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 FAM157BP0CG42 384 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 ZNF35P13682 527 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 ZNF12P17014 697 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 MYL9P24844 172 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 CALRP27797 417 aaKnown RBP9.56□□□□□ -0.88
SF3B3-205ENST00000564899 SERPINB10P48595 397 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 NAAAQ02083 359 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 TFF3Q07654 80 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 MALLQ13021 153 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 HSD17B12Q53GQ0 312 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 FAM27D1Q5T7N8 215 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 SEZ6L2Q6UXD5 910 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 USP43Q70EL4 1123 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 ZNF101Q8IZC7 436 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 CCDC54Q8NEL0 328 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 OR5L1Q8NGL2 311 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 PHYHIPQ92561 330 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 AKAP1Q92667 903 aaKnown RBP eCLIP9.56□□□□□ -0.88
SF3B3-205ENST00000564899 TMEM106AQ96A25 262 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 WFIKKN1Q96NZ8 548 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 SOX7Q9BT81 388 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 NPDC1Q9NQX5 325 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-205ENST00000564899 PTTG3PQ9NZH4 202 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 NDRG3Q9UGV2 375 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 STARD10Q9Y365 291 aa9.56□□□□□ -0.88
SF3B3-205ENST00000564899 HCFC1P51610 2035 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 A0A1W2PPW3 197 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 PIN1P1O15428 100 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 LMX1BO60663 402 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 ICMTO60725 284 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 MTRF1O75570 445 aaKnown RBP9.55□□□□□ -0.88
SF3B3-205ENST00000564899 DHRS3O75911 302 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 CRYAAP02489 173 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 RAF1P04049 648 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 CD99P14209 185 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 ZNF20P17024 532 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 CFL1P23528 166 aaKnown RBP9.55□□□□□ -0.88
SF3B3-205ENST00000564899 PCSK6P29122 969 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 CALCRP30988 508 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 MTNR1BP49286 362 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 PPP1CBP62140 327 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 ZNF92Q03936 586 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 SNTB1Q13884 538 aaKnown RBP9.55□□□□□ -0.88
SF3B3-205ENST00000564899 CNPY1Q3B7I2 92 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 TMEM108Q6UXF1 575 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 UNQ6126/PRO20091Q6UXV3 157 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 MRPL21Q7Z2W9 205 aaKnown RBP9.55□□□□□ -0.88
SF3B3-205ENST00000564899 PLPP7Q8NBV4 271 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 OR14K1Q8NGZ2 314 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 SPSB4Q96A44 273 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 ORAI1Q96D31 301 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 SPOCK3Q9BQ16 436 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 DCUN1D5Q9BTE7 237 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 DCSTAMPQ9H295 470 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 PPIL3Q9H2H8 161 aaKnown RBP9.55□□□□□ -0.88
SF3B3-205ENST00000564899 PLEKHA1Q9HB21 404 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 NGBQ9NPG2 151 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 ZNF275Q9NSD4 429 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-205ENST00000564899 V9GYS6 101 aa9.55□□□□□ -0.88
SF3B3-205ENST00000564899 STAB1Q9NY15 2570 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 hCG_38984A0A1B0GV85 526 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 LOC390937A0A1W2PQ73 354 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 CASKO14936 926 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 CDRT1O95170 752 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 IGFBP2P18065 325 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 PTAFRP25105 342 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 CD40P25942 277 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 RAD52P43351 418 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 UCP2P55851 309 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 PRSS12P56730 875 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 FAM3AP98173 230 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 MXD1Q05195 221 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 GK2Q14410 553 aaPredicted RBP9.54□□□□□ -0.88
SF3B3-205ENST00000564899 HLXQ14774 488 aaPredicted RBP9.54□□□□□ -0.88
SF3B3-205ENST00000564899 SPATA46Q5T0L3 261 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 Q6ZSR3 168 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 PGAP1Q75T13 922 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 SEMA6DQ8NFY4 1073 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 OR1J1Q8NGS3 322 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 LINC01560Q8TB33 94 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms