RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 XRCC3O43542 346 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 CTAG2O75638 210 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 TNFSF13O75888 250 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 BPNT1O95861 308 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 EDN3P14138 238 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 PRF1P14222 555 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 HOXB1P14653 301 aaPredicted RBP16.99■□□□□ 0.31
CLN6-205ENST00000564846 PTH2RP49190 550 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 MRPS10P82664 201 aaKnown RBP16.99■□□□□ 0.31
CLN6-205ENST00000564846 PLA2G7Q13093 441 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 RTL6Q6ICC9 239 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 IZUMO1Q8IYV9 350 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 PHF21AQ96BD5 680 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 BOD1Q96IK1 185 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 SLC22A4Q9H015 551 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 DIABLOQ9NR28 239 aa16.99■□□□□ 0.31
CLN6-205ENST00000564846 IGKV1-9A0A0C4DH69 117 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 hCG_38984A0A1B0GV85 526 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 CIB4A0PJX0 185 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 RAB6AP20340 208 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 COX5AP20674 150 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 CCNOP22674 350 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 APLNRP35414 380 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 ID4P47928 161 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 EFNB2P52799 333 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 ZNF92Q03936 586 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 ZNF57Q68EA5 555 aaPredicted RBP16.98■□□□□ 0.31
CLN6-205ENST00000564846 CCBE1Q6UXH8 406 aaPredicted RBP16.98■□□□□ 0.31
CLN6-205ENST00000564846 CD163Q86VB7 1156 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 ZNF584Q8IVC4 421 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 C1orf162Q8NEQ5 155 aaPredicted RBP16.98■□□□□ 0.31
CLN6-205ENST00000564846 SMIM4Q8WVI0 70 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 APOBEC3DQ96AK3 386 aaPredicted RBP16.98■□□□□ 0.31
CLN6-205ENST00000564846 C11orf54Q9H0W9 315 aaPredicted RBP16.98■□□□□ 0.31
CLN6-205ENST00000564846 TUBD1Q9UJT1 453 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 PROCRQ9UNN8 238 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 FAM215AQ9Y5M1 114 aa16.98■□□□□ 0.31
CLN6-205ENST00000564846 RAD51DO75771 328 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 SERPINA5P05154 406 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 ACKR3P25106 362 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 TIMP3P35625 211 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 RFX2P48378 723 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 GSK3AP49840 483 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 TAS2R20P59543 309 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 UBE2NP61088 152 aaKnown RBP16.97■□□□□ 0.31
CLN6-205ENST00000564846 GABRA6Q16445 453 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 NRARPQ7Z6K4 114 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 SSC4DQ8WTU2 575 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 YIPF5Q969M3 257 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 ITFG2Q969R8 447 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 MGAQ8IWI9 3026 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 GABARAPH6UMI1 98 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 LYZL6O75951 148 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 FAM87AP0C7U9 286 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 TMIGD3P0DMS9 266 aaPredicted RBP16.97■□□□□ 0.31
CLN6-205ENST00000564846 TDGF1P3P51864 188 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 FAM3AP98173 230 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 MALLQ13021 153 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 OR8B8Q15620 311 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 UBE2V2Q15819 145 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 MZT2BQ6NZ67 158 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 MDP1Q86V88 176 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 ANGPTL5Q86XS5 388 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 GABRG1Q8N1C3 465 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 CISD2Q8N5K1 135 aaKnown RBP16.97■□□□□ 0.31
CLN6-205ENST00000564846 STARD4Q96DR4 205 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 KCNK15Q9H427 330 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 NEK6Q9HC98 313 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 RAB22AQ9UL26 194 aa16.97■□□□□ 0.31
CLN6-205ENST00000564846 CACNA1GO43497 2377 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 A0A0A6YYH2 397 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 GGT3PA6NGU5 568 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 A6NJ64 397 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 LANCL1O43813 399 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 TOXO94900 526 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 CGAP01215 116 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 IL2RAP01589 272 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 CCL2P13500 99 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 SPNP16150 400 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 DGCR2P98153 550 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 TNK1Q13470 666 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 PNLDC1Q8NA58 520 aaKnown RBP16.96■□□□□ 0.31
CLN6-205ENST00000564846 SPSB1Q96BD6 273 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 ZNF75AQ96N20 296 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 ATG5Q9H1Y0 275 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 FBLN5Q9UBX5 448 aa16.96■□□□□ 0.31
CLN6-205ENST00000564846 DMXL2Q8TDJ6 3036 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 CD3GP09693 182 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 P2RY6Q15077 328 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 CNN3Q15417 329 aaKnown RBP16.95■□□□□ 0.3
CLN6-205ENST00000564846 KISS1Q15726 138 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 CLVS2Q5SYC1 327 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 ZBTB37Q5TC79 503 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 TMEM42Q69YG0 159 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 AWAT2Q6E213 333 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 SPACA5Q96QH8 159 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 GPER1Q99527 375 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 SLX1AQ9BQ83 275 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 OPA3Q9H6K4 179 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 RBFOX1Q9NWB1 397 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms