RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, human

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40C-208	ENST00000564703	VHL	P40337	213 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	CDON	Q4KMG0	1287 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	ZNF684	Q5T5D7	378 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	IZUMO2	Q6UXV1	221 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	ELMOD2	Q8IZ81	293 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	OR10AD1	Q8NGE0	317 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	OR52I1	Q8NGK6	324 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	OR8S1	Q8NH09	359 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	OR51E1	Q8TCB6	317 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	TIMD4	Q96H15	378 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	HIST1H2AA	Q96QV6	131 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	OR2V2	Q96R30	315 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	ALG8	Q9BVK2	526 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	TMUB1	Q9BVT8	246 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	FGF20	Q9NP95	211 aa	Predicted RBP	13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	PPP1R3C	Q9UQK1	317 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	CSMD2	Q7Z408	3487 aa		13.57	□□□□□ -0.24
RAB40C-208	ENST00000564703	hCG_38984	A0A1B0GV85	526 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	EFCAB10	A6NFE3	127 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703		H0YL77	283 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	PPIH	O43447	177 aa	Known RBP	13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	LILRA1	O75019	489 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	FAM20B	O75063	409 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	MYL12A	P19105	171 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	USF1	P22415	310 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	GIF	P27352	417 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	NR4A2	P43354	598 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	GPR6	P46095	362 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	OR12D2	P58182	307 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	MFGE8	Q08431	387 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	TMPRSS11A	Q6ZMR5	421 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	BPIFB6	Q8NFQ5	453 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	ITLN1	Q8WWA0	313 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	RORB	Q92753	470 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	RAB1C	Q92928	201 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	PPP1R14A	Q96A00	147 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	TMEM80	Q96HE8	168 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	GPR84	Q9NQS5	396 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	C14orf119	Q9NWQ9	140 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	ERVK13-1	Q9NX77	482 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	SCN3B	Q9NY72	215 aa		13.56	□□□□□ -0.24
RAB40C-208	ENST00000564703	ANXA2P2	A6NMY6	339 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703		F5H5P2	479 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	IFNL4	K9M1U5	179 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	SRSF10	O75494	262 aa	Known RBP	13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	IGHA1	P01876	353 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	TTR	P02766	147 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	HTR1A	P08908	422 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	INHBB	P09529	407 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	ANOS1	P23352	680 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	PSMB10	P40306	273 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	GBX2	P52951	348 aa	Predicted RBP	13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	RIPPLY1	Q0D2K3	151 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	MRPL28	Q13084	256 aa	Known RBP	13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	SYS1	Q8N2H4	156 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	STX19	Q8N4C7	294 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	CELF2-AS1	Q8N7Q2	184 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	SEMA6D	Q8NFY4	1073 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	HAVCR2	Q8TDQ0	301 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	PIGC	Q92535	297 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	YIPF5	Q969M3	257 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	MEGF10	Q96KG7	1140 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	LYZL4	Q96KX0	146 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	C4orf36	Q96KX1	117 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	ADAT1	Q9BUB4	502 aa	Known RBP	13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	PAPOLG	Q9BWT3	736 aa	Known RBP	13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	ABCB9	Q9NP78	766 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	G6PC2	Q9NQR9	355 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	PLCXD1	Q9NUJ7	323 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	ACOXL	Q9NUZ1	547 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	TREM2	Q9NZC2	230 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	SLC22A13	Q9Y226	551 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703	MPC1	Q9Y5U8	109 aa		13.55	□□□□□ -0.24
RAB40C-208	ENST00000564703		A0A1B0GVI7	797 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	CLDN25	C9JDP6	229 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	MLNR	O43193	412 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	IRF2	P14316	349 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	ST3GAL4	Q11206	333 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	RIN1	Q13671	783 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	OR8B8	Q15620	311 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	ODF4	Q2M2E3	257 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	DOK3	Q7L591	496 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	CATSPERD	Q86XM0	798 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	CIART	Q8N365	385 aa	Predicted RBP	13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	GGH	Q92820	318 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	ERGIC1	Q969X5	290 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	BPESC1	Q9GZL8	116 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	CNOT2	Q9NZN8	540 aa	Known RBP	13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	DIMT1	Q9UNQ2	313 aa	Known RBP	13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	RHBDD3	Q9Y3P4	386 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	DYSF	O75923	2080 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	MED13L	Q71F56	2210 aa		13.54	□□□□□ -0.24
RAB40C-208	ENST00000564703	OTOG	Q6ZRI0	2925 aa		13.53	□□□□□ -0.24
RAB40C-208	ENST00000564703	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.53	□□□□□ -0.24
RAB40C-208	ENST00000564703		A0A1B0GWJ7	208 aa		13.53	□□□□□ -0.24
RAB40C-208	ENST00000564703	LRRC30	A6NM36	301 aa		13.53	□□□□□ -0.24
RAB40C-208	ENST00000564703	VWC2L	B2RUY7	222 aa		13.53	□□□□□ -0.24

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