RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 SPERTQ8NA61 448 aa25.78■■□□□ 1.72
CMTM4-204ENST00000563952 OR8S1Q8NH09 359 aa25.78■■□□□ 1.72
CMTM4-204ENST00000563952 TTTY10Q9BZA0 68 aa25.78■■□□□ 1.72
CMTM4-204ENST00000563952 NIPAL2Q9H841 368 aa25.78■■□□□ 1.72
CMTM4-204ENST00000563952 J3QLI3 93 aa25.77■■□□□ 1.72
CMTM4-204ENST00000563952 RPS2P15880 293 aaKnown RBP25.77■■□□□ 1.72
CMTM4-204ENST00000563952 POLR2IP36954 125 aaKnown RBP25.77■■□□□ 1.72
CMTM4-204ENST00000563952 ESCO2Q56NI9 601 aa25.77■■□□□ 1.72
CMTM4-204ENST00000563952 KCTD18Q6PI47 426 aaPredicted RBP25.77■■□□□ 1.72
CMTM4-204ENST00000563952 C1orf229Q6ZS94 237 aaPredicted RBP25.77■■□□□ 1.72
CMTM4-204ENST00000563952 BOLLQ8N9W6 283 aaKnown RBP25.77■■□□□ 1.72
CMTM4-204ENST00000563952 C19orf18Q8NEA5 215 aa25.77■■□□□ 1.72
CMTM4-204ENST00000563952 TMEM158Q8WZ71 300 aa25.77■■□□□ 1.72
CMTM4-204ENST00000563952 PKP2Q99959 881 aa25.77■■□□□ 1.72
CMTM4-204ENST00000563952 TMEM246Q9BRR3 403 aa25.77■■□□□ 1.72
CMTM4-204ENST00000563952 RGCCQ9H4X1 137 aa25.77■■□□□ 1.72
CMTM4-204ENST00000563952 EBAG9O00559 213 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 GATA3P23771 443 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 EFNB1P98172 346 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 MZT1Q08AG7 82 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 AADACL4Q5VUY2 407 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 NXNL2Q5VZ03 156 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 OSBPL10Q9BXB5 764 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 C7orf69Q9H7B7 122 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 C14orf119Q9NWQ9 140 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 C1orf123Q9NWV4 160 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 RNF7Q9UBF6 113 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 COPS3Q9UNS2 423 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 TMEM14AQ9Y6G1 99 aa25.76■■□□□ 1.71
CMTM4-204ENST00000563952 SLC22A31A6NKX4 558 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 A6NLC8 198 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 WNT2P09544 360 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 HOXA4Q00056 320 aaPredicted RBP25.75■■□□□ 1.71
CMTM4-204ENST00000563952 ZNF404Q494X3 552 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 DEFB108BQ8NET1 73 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 OR8B12Q8NGG6 310 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 RBM4BQ9BQ04 359 aaKnown RBP25.75■■□□□ 1.71
CMTM4-204ENST00000563952 PAPOLGQ9BWT3 736 aaKnown RBP25.75■■□□□ 1.71
CMTM4-204ENST00000563952 GABARAPL3Q9BY60 117 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 MROQ9BYG7 248 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 MMP26Q9NRE1 261 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 MIOXQ9UGB7 285 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 MXRA5Q9NR99 2828 aa25.75■■□□□ 1.71
CMTM4-204ENST00000563952 WNK2Q9Y3S1 2297 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 PRR32B1ATL7 298 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 H3BNX3 289 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 PTBP3O95758 552 aaKnown RBP25.74■■□□□ 1.71
CMTM4-204ENST00000563952 ADRA2CP18825 462 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 GNALP38405 381 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 GID4Q8IVV7 300 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 TEX29Q8N6K0 151 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 PLPP7Q8NBV4 271 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 CSNK2A3Q8NEV1 391 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 ASB17Q8WXJ9 295 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 OCEL1Q9H607 264 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 PPP1R3EQ9H7J1 279 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 IKZF2Q9UKS7 526 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 LRCH1Q9Y2L9 728 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 RHBDD3Q9Y3P4 386 aa25.74■■□□□ 1.71
CMTM4-204ENST00000563952 ZFP1Q6P2D0 407 aa25.73■■□□□ 1.71
CMTM4-204ENST00000563952 ZNF826PQ6ZT77 177 aa25.73■■□□□ 1.71
CMTM4-204ENST00000563952 SLC35F2Q8IXU6 374 aa25.73■■□□□ 1.71
CMTM4-204ENST00000563952 RFLNBQ8N5W9 214 aa25.73■■□□□ 1.71
CMTM4-204ENST00000563952 LYZL4Q96KX0 146 aa25.73■■□□□ 1.71
CMTM4-204ENST00000563952 OR8B4Q96RC9 309 aa25.73■■□□□ 1.71
CMTM4-204ENST00000563952 SSBP3Q9BWW4 388 aaPredicted RBP25.73■■□□□ 1.71
CMTM4-204ENST00000563952 OR5V1Q9UGF6 321 aa25.73■■□□□ 1.71
CMTM4-204ENST00000563952 PPIAL4CA0A0B4J2A2 164 aa25.72■■□□□ 1.71
CMTM4-204ENST00000563952 TMEM269A0A1B0GVZ9 245 aa25.72■■□□□ 1.71
CMTM4-204ENST00000563952 hCG_1807616A0A1W2PRN6 198 aa25.72■■□□□ 1.71
CMTM4-204ENST00000563952 A8MXK9 166 aa25.72■■□□□ 1.71
CMTM4-204ENST00000563952 TRAPPC2LH3BP13 241 aa25.72■■□□□ 1.71
CMTM4-204ENST00000563952 FSTL3O95633 263 aa25.72■■□□□ 1.71
CMTM4-204ENST00000563952 OR8B8Q15620 311 aa25.72■■□□□ 1.71
CMTM4-204ENST00000563952 DEGS2Q6QHC5 323 aa25.72■■□□□ 1.71
CMTM4-204ENST00000563952 FTMTQ8N4E7 242 aa25.72■■□□□ 1.71
CMTM4-204ENST00000563952 NEIL1Q96FI4 390 aaPredicted RBP25.72■■□□□ 1.71
CMTM4-204ENST00000563952 ADGRL4Q9HBW9 690 aa25.72■■□□□ 1.71
CMTM4-204ENST00000563952 TCF21O43680 179 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 CD80P33681 288 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 GNB2P62879 340 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 ROM1Q03395 351 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 SNCBQ16143 134 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 SFRP4Q6FHJ7 346 aaPredicted RBP25.71■■□□□ 1.71
CMTM4-204ENST00000563952 LYPD2Q6UXB3 125 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 NLRC3Q7RTR2 1065 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 C1QL2Q7Z5L3 287 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 ZNF679Q8IYX0 411 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 OR8B3Q8NGG8 313 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 OR8B2Q96RD0 313 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 FAM206AQ9NX38 181 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 OPN4Q9UHM6 478 aa25.71■■□□□ 1.71
CMTM4-204ENST00000563952 POLR3KQ9Y2Y1 108 aaPredicted RBP25.71■■□□□ 1.71
CMTM4-204ENST00000563952 COL6A5A8TX70 2615 aa25.7■■□□□ 1.71
CMTM4-204ENST00000563952 ZNF254O75437 659 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 CPT2P23786 658 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 ACKR3P25106 362 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 RIDAP52758 137 aaKnown RBP25.7■■□□□ 1.7
CMTM4-204ENST00000563952 CXCR4P61073 352 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 SCGB2A2Q13296 93 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms