RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FJX1Q86VR8 437 aa18.98■□□□□ 0.63
LINC01960-201ENST00000563759 TRMT10AQ8TBZ6 339 aaKnown RBP18.98■□□□□ 0.63
LINC01960-201ENST00000563759 PP6455Q8WZ26 134 aa18.98■□□□□ 0.63
LINC01960-201ENST00000563759 TMEM138Q9NPI0 162 aa18.98■□□□□ 0.63
LINC01960-201ENST00000563759 TBCCD1Q9NVR7 557 aa18.98■□□□□ 0.63
LINC01960-201ENST00000563759 PTTG3PQ9NZH4 202 aa18.98■□□□□ 0.63
LINC01960-201ENST00000563759 STARD10Q9Y365 291 aa18.98■□□□□ 0.63
LINC01960-201ENST00000563759 SMG1Q96Q15 3661 aaKnown RBP18.97■□□□□ 0.63
LINC01960-201ENST00000563759 INHBBP09529 407 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 CECR9P0C854 216 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 ACKR3P25106 362 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 GK2Q14410 553 aaPredicted RBP18.97■□□□□ 0.63
LINC01960-201ENST00000563759 PPA1Q15181 289 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 SPANXN2Q5MJ10 180 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 JAGN1Q8N5M9 183 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 OR5L1Q8NGL2 311 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 WDR12Q9GZL7 423 aaKnown RBP18.97■□□□□ 0.63
LINC01960-201ENST00000563759 OPA3Q9H6K4 179 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 LIN7BQ9HAP6 207 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 COQ3Q9NZJ6 369 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 A0A0B4J203 849 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 C16orf97H3BN30 126 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 ATXN7O15265 892 aaPredicted RBP18.97■□□□□ 0.63
LINC01960-201ENST00000563759 PAHP00439 452 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 IGLV1-44P01699 117 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 ERCC1P07992 297 aaPredicted RBP18.97■□□□□ 0.63
LINC01960-201ENST00000563759 CCKARP32238 428 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 OR8B8Q15620 311 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 TAB1Q15750 504 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 FAM169BQ8N8A8 192 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 CHST5Q9GZS9 411 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 ABRACLQ9P1F3 81 aa18.97■□□□□ 0.63
LINC01960-201ENST00000563759 HIVEP3Q5T1R4 2406 aa18.96■□□□□ 0.63
LINC01960-201ENST00000563759 J3QW42 95 aa18.96■□□□□ 0.63
LINC01960-201ENST00000563759 HPGDSO60760 199 aa18.96■□□□□ 0.63
LINC01960-201ENST00000563759 FAM157BP0CG42 384 aa18.96■□□□□ 0.63
LINC01960-201ENST00000563759 SNRPBP14678 240 aaKnown RBP18.96■□□□□ 0.63
LINC01960-201ENST00000563759 CLDN12P56749 244 aa18.96■□□□□ 0.63
LINC01960-201ENST00000563759 ZNF529Q6P280 563 aa18.96■□□□□ 0.63
LINC01960-201ENST00000563759 MIXL1Q9H2W2 232 aa18.96■□□□□ 0.63
LINC01960-201ENST00000563759 EPG5Q9HCE0 2579 aa18.96■□□□□ 0.63
LINC01960-201ENST00000563759 IGHV1-18A0A0C4DH31 117 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 MAGEB3O15480 346 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 SMPD2O60906 423 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 TMEM127O75204 238 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 HCKP08631 526 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 CHRNB4P30926 498 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 TNFSF8P32971 234 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 DYNC1I2Q13409 638 aaKnown RBP18.95■□□□□ 0.62
LINC01960-201ENST00000563759 HLXQ14774 488 aaPredicted RBP18.95■□□□□ 0.62
LINC01960-201ENST00000563759 ZNF846Q147U1 533 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 SAMD12Q8N8I0 201 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 LGALS14Q8TCE9 139 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 WDFY2Q96P53 400 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 USB1Q9BQ65 265 aaKnown RBP18.95■□□□□ 0.62
LINC01960-201ENST00000563759 REPIN1Q9BWE0 567 aaKnown RBP18.95■□□□□ 0.62
LINC01960-201ENST00000563759 CGGBP1Q9UFW8 167 aaPredicted RBP18.95■□□□□ 0.62
LINC01960-201ENST00000563759 STEAP1Q9UHE8 339 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 ADAM30Q9UKF2 790 aa18.95■□□□□ 0.62
LINC01960-201ENST00000563759 ICMTO60725 284 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 ZNF83P51522 516 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 TNK1Q13470 666 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 MFSD4AQ8N468 514 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 NKX3-1Q99801 234 aaPredicted RBP18.94■□□□□ 0.62
LINC01960-201ENST00000563759 MRI1Q9BV20 369 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 POFUT1Q9H488 388 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 M0R1B8 84 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 SLC17A2O00624 439 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 ASCL1P50553 236 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 RAB11BQ15907 218 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 SPATA46Q5T0L3 261 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 C1QTNF12Q5T7M4 302 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 UNQ6126/PRO20091Q6UXV3 157 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 UTS2BQ765I0 119 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 CCDC190Q86UF4 302 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 OR52N4Q8NGI2 321 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 FOXRED1Q96CU9 486 aaPredicted RBP18.94■□□□□ 0.62
LINC01960-201ENST00000563759 CCDC120Q96HB5 630 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 DIRAS2Q96HU8 199 aa18.94■□□□□ 0.62
LINC01960-201ENST00000563759 GGT3PA6NGU5 568 aa18.93■□□□□ 0.62
LINC01960-201ENST00000563759 CFPP27918 469 aa18.93■□□□□ 0.62
LINC01960-201ENST00000563759 OR5AS1Q8N127 324 aa18.93■□□□□ 0.62
LINC01960-201ENST00000563759 OR56B2PQ8NGI1 322 aa18.93■□□□□ 0.62
LINC01960-201ENST00000563759 OR6M1Q8NGM8 313 aa18.93■□□□□ 0.62
LINC01960-201ENST00000563759 NPRL2Q8WTW4 380 aa18.93■□□□□ 0.62
LINC01960-201ENST00000563759 SORCS2Q96PQ0 1159 aa18.93■□□□□ 0.62
LINC01960-201ENST00000563759 METTL17Q9H7H0 456 aaPredicted RBP18.93■□□□□ 0.62
LINC01960-201ENST00000563759 SPATA2Q9UM82 520 aa18.93■□□□□ 0.62
LINC01960-201ENST00000563759 RELNP78509 3460 aa18.93■□□□□ 0.62
LINC01960-201ENST00000563759 CADP27708 2225 aa18.93■□□□□ 0.62
LINC01960-201ENST00000563759 ZNF816-ZNF321PA0A0X1KG74 233 aa18.92■□□□□ 0.62
LINC01960-201ENST00000563759 FAM90A27PA6NNH2 459 aa18.92■□□□□ 0.62
LINC01960-201ENST00000563759 FAM25AB3EWG3 89 aa18.92■□□□□ 0.62
LINC01960-201ENST00000563759 FAM25CB3EWG5 89 aa18.92■□□□□ 0.62
LINC01960-201ENST00000563759 FAM25GB3EWG6 89 aa18.92■□□□□ 0.62
LINC01960-201ENST00000563759 HTR2CP28335 458 aa18.92■□□□□ 0.62
LINC01960-201ENST00000563759 UCP2P55851 309 aa18.92■□□□□ 0.62
LINC01960-201ENST00000563759 PPP1CBP62140 327 aa18.92■□□□□ 0.62
LINC01960-201ENST00000563759 P2RY14Q15391 338 aa18.92■□□□□ 0.62
LINC01960-201ENST00000563759 DMRTC1Q5HYR2 192 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms