RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 RNF2Q99496 336 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 SOX7Q9BT81 388 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 TMEM208Q9BTX3 173 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 CD84Q9UIB8 345 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 GBF1Q92538 1859 aa5.68□□□□□ -1.5
CLK3-212ENST00000563418 CACNA1SQ13698 1873 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 SSSCA1O60232 199 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 RHBDL1O75783 438 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 COX5BP10606 129 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 PPOXP50336 477 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 SELENOVP59797 346 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 RPS15AP62244 130 aaKnown RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 LCN2P80188 198 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 PKDCCQ504Y2 493 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 MARCH8Q5T0T0 291 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 DHRS11Q6UWP2 260 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 CLEC18BQ6UXF7 455 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 MAML2Q8IZL2 1156 aaPredicted RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 OR1F2PQ96R84 312 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 PBX4Q9BYU1 374 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 ANTXRLA6NF34 631 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 C9J4A7 227 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 DNPH1O43598 174 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 NUDT3O95989 172 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 PGA4P0DJD7 388 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 PGA5P0DJD9 388 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 GABRA3P34903 492 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 CRMP1Q14194 572 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 C9orf135Q5VTT2 229 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 PGBD5Q8N414 524 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 LMLNQ96KR4 655 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 PDLIM7Q9NR12 457 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 ATRAIDQ6UW56 229 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 TMEM151BQ8IW70 566 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 SIRT6Q8N6T7 355 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 SUSD6Q92537 303 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 ISG20L2Q9H9L3 353 aaKnown RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 RHBDD3Q9Y3P4 386 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 CLEC3AO75596 197 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 HPRT1P00492 218 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 GUSBP08236 651 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 TRGC1P0CF51 173 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 FBLN7Q53RD9 439 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 MARCH1Q8TCQ1 289 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 BOD1Q96IK1 185 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 SIGMAR1Q99720 223 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 RGPD2P0DJD1 1756 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 SOX1O00570 391 aaPredicted RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 DDAH2O95865 285 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 FZD5Q13467 585 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 NRSN1Q8IZ57 195 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 JSRP1Q96MG2 331 aaPredicted RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 TNFRSF12AQ9NP84 129 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 HAO2Q9NYQ3 351 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 TRAPPC2LQ9UL33 140 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 LIPGQ9Y5X9 500 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 COL2A1P02458 1487 aaPredicted RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 UPK3BL1B0FP48 263 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 UPK3BL2E5RIL1 263 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 ERVK-16P61578 105 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 DUSP8Q13202 625 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 ZNF776Q68DI1 518 aaPredicted RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 PLPP7Q8NBV4 271 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 PTPMT1Q8WUK0 201 aaPredicted RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 PCGF1Q9BSM1 259 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 IL17CQ9P0M4 197 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 HSPB8Q9UJY1 196 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 MMACHCQ9Y4U1 282 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 WTIPA6NIX2 430 aaPredicted RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 NHLH1Q02575 133 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 LCN15Q6UWW0 184 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 TMEM207Q6UWW9 146 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 ERN2Q76MJ5 926 aaKnown RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 PRR22Q8IZ63 422 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 ROBO4Q8WZ75 1007 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 MBNL1Q9NR56 388 aaKnown RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 COLCA2A8K830 154 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 COMPP49747 757 aaPredicted RBP5.67□□□□□ -1.5
CLK3-212ENST00000563418 GPR32P1Q8NGA4 272 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 NXPE3Q969Y0 559 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 TXNDC17Q9BRA2 123 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 MAP1LC3CQ9BXW4 147 aa5.67□□□□□ -1.5
CLK3-212ENST00000563418 C8orf89P0DMQ9 161 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 BCL2P10415 239 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 GCH1P30793 250 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 SMIM21Q3B7S5 101 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 KIAA0895LQ68EN5 471 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 ARL14EPQ8N8R7 260 aaPredicted RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 BLNKQ8WV28 456 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 FGGYQ96C11 551 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 SMOC1Q9H4F8 434 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 NHSQ6T4R5 1651 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 SOD2P04179 222 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 TSFMP43897 325 aaKnown RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 HLA-DRB5Q30154 266 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 SLC25A26Q70HW3 274 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 MSRB3Q8IXL7 192 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 SLAMF6Q96DU3 332 aa5.66□□□□□ -1.5
CLK3-212ENST00000563418 NEIL1Q96FI4 390 aaPredicted RBP5.66□□□□□ -1.5
CLK3-212ENST00000563418 SMIM8Q96KF7 97 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms