RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ABCA1O95477 2261 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 A0A0U1RQV5 110 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 LOC100289279A0A1B0GTE1 492 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 A0A1B0GTI1 187 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 TMEM269A0A1B0GVZ9 245 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 PHYHO14832 338 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 TTRP02766 147 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 DBTP11182 482 aaKnown RBP7.2□□□□□ -1.26
UBR1-204ENST00000563239 TNFSF4P23510 183 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 DDOSTP39656 456 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 CD200P41217 278 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 GATA4P43694 442 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 CHN2P52757 468 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 RIDAP52758 137 aaKnown RBP7.2□□□□□ -1.26
UBR1-204ENST00000563239 MVKQ03426 396 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 ZNF91Q05481 1191 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 MPPED2Q15777 294 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 SMN1Q16637 294 aaKnown RBP7.2□□□□□ -1.26
UBR1-204ENST00000563239 TIGD6Q17RP2 521 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 GFOD2Q3B7J2 385 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 ZNF691Q5VV52 312 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 LAIR2Q6ISS4 152 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 WDR86Q86TI4 376 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 OR10H4Q8NGA5 316 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 ZNF420Q8TAQ5 688 aaPredicted RBP7.2□□□□□ -1.26
UBR1-204ENST00000563239 HPS1Q92902 700 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 MSI2Q96DH6 328 aaKnown RBP7.2□□□□□ -1.26
UBR1-204ENST00000563239 FGF23Q9GZV9 251 aaPredicted RBP7.2□□□□□ -1.26
UBR1-204ENST00000563239 PBOV1Q9GZY1 135 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 RGCCQ9H4X1 137 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 AMBNQ9NP70 447 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 C8orf4Q9NR00 106 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 TMEM106BQ9NUM4 274 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 MRPS18AQ9NVS2 196 aaKnown RBP7.2□□□□□ -1.26
UBR1-204ENST00000563239 NUFIP1Q9UHK0 495 aaKnown RBP7.2□□□□□ -1.26
UBR1-204ENST00000563239 IKZF2Q9UKS7 526 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBR1-204ENST00000563239 RHBDD3Q9Y3P4 386 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 R4GMQ9 66 aa7.2□□□□□ -1.26
UBR1-204ENST00000563239 METTL15A6NJ78 407 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 FAM157AC9JC47 383 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 CLDN25C9JDP6 229 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 INAFM1C9JVW0 142 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 TMEM178BH3BS89 294 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 MPZL2O60487 215 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 GMDSO60547 372 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 SULT1C4O75897 302 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 IGHV2-70P01814 119 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 GNAO1P09471 354 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 HOXB4P17483 251 aaPredicted RBP7.19□□□□□ -1.26
UBR1-204ENST00000563239 TNFRSF1AP19438 455 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 CFL1P23528 166 aaKnown RBP7.19□□□□□ -1.26
UBR1-204ENST00000563239 SRP9P49458 86 aaKnown RBP7.19□□□□□ -1.26
UBR1-204ENST00000563239 HOXA4Q00056 320 aaPredicted RBP7.19□□□□□ -1.26
UBR1-204ENST00000563239 SLC34A1Q06495 639 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 ZMYND11Q15326 602 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 OR8G1Q15617 311 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 ZNF829Q3KNS6 432 aaPredicted RBP7.19□□□□□ -1.26
UBR1-204ENST00000563239 CDONQ4KMG0 1287 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 TP53I3Q53FA7 332 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 C6orf52Q5T4I8 152 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 LCE2DQ5TA82 110 aaPredicted RBP7.19□□□□□ -1.26
UBR1-204ENST00000563239 PRAMEF6Q5VXH4 476 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 LIPNQ5VXI9 398 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 CYB5R2Q6BCY4 276 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 Q6ZSR3 168 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 MOGAT3Q86VF5 341 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 CATSPERDQ86XM0 798 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 C11orf53Q8IXP5 236 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 ELMOD2Q8IZ81 293 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 PRSS35Q8N3Z0 413 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 CELF2-AS1Q8N7Q2 184 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 PLPP7Q8NBV4 271 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 ZNF555Q8NEP9 628 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 OR51E1Q8TCB6 317 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 Q8TCH9 128 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 CYGBQ8WWM9 190 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 RORBQ92753 470 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 ADAT1Q9BUB4 502 aaKnown RBP7.19□□□□□ -1.26
UBR1-204ENST00000563239 SLC22A4Q9H015 551 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 NARFLQ9H6Q4 476 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 RNPEPL1Q9HAU8 725 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 GPR84Q9NQS5 396 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 OR52A1Q9UKL2 312 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 PPP1R3CQ9UQK1 317 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 SLC22A13Q9Y226 551 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 MYRFQ9Y2G1 1151 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 NPTNQ9Y639 398 aa7.19□□□□□ -1.26
UBR1-204ENST00000563239 SONP18583 2426 aaKnown RBP7.19□□□□□ -1.26
UBR1-204ENST00000563239 DYSFO75923 2080 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 HIVEP2P31629 2446 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 LOC110117498-PIK3R3F6TDL0 507 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 FAM20BO75063 409 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 RPP14O95059 124 aaKnown RBP7.18□□□□□ -1.26
UBR1-204ENST00000563239 CYB5R3P00387 301 aaPredicted RBP7.18□□□□□ -1.26
UBR1-204ENST00000563239 CST4P01036 141 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 IGHV2-5P01817 119 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 IGHA1P01876 353 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 KRT8P05787 483 aa7.18□□□□□ -1.26
UBR1-204ENST00000563239 ZNF16P17020 682 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms