RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 TCEAL3Q969E4 200 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 RERGQ96A58 199 aaPredicted RBP2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 DCPSQ96C86 337 aaKnown RBP2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 HAUS1Q96CS2 278 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 C19orf60Q96EN9 201 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF488Q96MN9 340 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF681Q96N22 645 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 OR2A5Q96R48 311 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 CDX2Q99626 313 aaPredicted RBP2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 GPR21Q99679 349 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 HSD17B10Q99714 261 aaKnown RBP2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 TMEM243Q9BU79 118 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 OSBPL11Q9BXB4 747 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 IFI27L2Q9H2X8 130 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 SAV1Q9H4B6 383 aaPredicted RBP2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 RBAKQ9NYW8 714 aaPredicted RBP2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 STMN3Q9NZ72 180 aa2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 NOSIPQ9Y314 301 aaKnown RBP2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 TSSC4Q9Y5U2 329 aaPredicted RBP2.1□□□□□ -2.07
SHCBP1-202ENST00000563219 COL22A1Q8NFW1 1626 aaPredicted RBP2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 GPATCH8Q9UKJ3 1502 aaKnown RBP2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 A0A096LNJ9 63 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 A6NDN8 102 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 SEC14L6B5MCN3 397 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 F8VZ95 297 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 K7ERQ8 282 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 POLR1CO15160 346 aaPredicted RBP2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 CETN3O15182 167 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 RAD51BO15315 384 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 TRAPPC6AO75865 159 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 CCL2P13500 99 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 PPOXP50336 477 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 HCCSP53701 268 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 PSMC5P62195 406 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 ARG2P78540 354 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 ANGPT1Q15389 498 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 CPTPQ5TA50 214 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 DEGS2Q6QHC5 323 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 EPGNQ6UW88 154 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 WDFY1Q8IWB7 410 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 C12orf56Q8IXR9 622 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 SYCE1Q8N0S2 351 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 LGI3Q8N145 548 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 CYB561D1Q8N8Q1 229 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 SYNPRQ8TBG9 265 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 TMEM234Q8WY98 164 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 CDKL2Q92772 493 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 CDS1Q92903 461 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 LRRC45Q96CN5 670 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 Q96MT0 163 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 LINC00167Q96N53 147 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF382Q96SR6 550 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 BBS2Q9BXC9 721 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 RAB1BQ9H0U4 201 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 VCX3AQ9NNX9 186 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 ZNF302Q9NR11 478 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 RBFOX1Q9NWB1 397 aaKnown RBP2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 OR12D3Q9UGF7 316 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 GGA2Q9UJY4 613 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 KLF12Q9Y4X4 402 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 OR51B2Q9Y5P1 312 aa2.09□□□□□ -2.07
SHCBP1-202ENST00000563219 BRD4O60885 1362 aaPredicted RBP2.09□□□□□ -2.08
SHCBP1-202ENST00000563219 PALLDQ8WX93 1383 aa2.09□□□□□ -2.08
SHCBP1-202ENST00000563219 NUP214P35658 2090 aaPredicted RBP2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 A0A0B4J2E0 115 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 GOLGA8QA0A0J9YX86 632 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 A0A1B0GVX0 72 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 PDZK1P1A8MUH7 402 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 PRMT5O14744 637 aaPredicted RBP2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 CTNSO60931 367 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 SPAG7O75391 227 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 GLSO94925 669 aaPredicted RBP2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 SEMA3DO95025 777 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 S100A6P06703 90 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 CTSLP07711 333 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 OR56A5P0C7T3 313 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 PGAM1P18669 254 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 ARR3P36575 388 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 RANBP1P43487 201 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 SYNJ2BPP57105 145 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 OR2B8PP59922 312 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 KRTAP10-1P60331 282 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 SLC35A1P78382 337 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 DYNC1I2Q13409 638 aaKnown RBP2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 KIR2DS1Q14954 304 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 MAD2L1BPQ15013 274 aaPredicted RBP2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 PTGES3Q15185 160 aaKnown RBP2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 OR1Q1Q15612 314 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 TNXAQ16473 311 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 DEFB116Q30KQ4 102 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 TSPO2Q5TGU0 170 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 CALHM1Q8IU99 346 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 PGAM4Q8N0Y7 254 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 ATPAF2Q8N5M1 289 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 CYB561A3Q8NBI2 242 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 UBAC2Q8NBM4 344 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 COQ8AQ8NI60 647 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 RXFP4Q8TDU9 374 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 PTX4Q96A99 478 aa2.08□□□□□ -2.08
SHCBP1-202ENST00000563219 FLYWCH2Q96CP2 140 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms