RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 DNAJB11Q9UBS4 358 aa10.72□□□□□ -0.69
SF3B3-202ENST00000562722 MAGEL2Q9UJ55 1249 aa10.72□□□□□ -0.69
SF3B3-202ENST00000562722 RPUSD1Q9UJJ7 312 aaKnown RBP10.72□□□□□ -0.69
SF3B3-202ENST00000562722 CDH10Q9Y6N8 788 aa10.72□□□□□ -0.69
SF3B3-202ENST00000562722 COMMD3-BMI1R4GMX3 469 aa10.72□□□□□ -0.69
SF3B3-202ENST00000562722 A0A1B0GVI7 797 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 SLC22A31A6NKX4 558 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 SEMG1P04279 462 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 FBP1P09467 338 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 EEF1B2P24534 225 aaKnown RBP10.71□□□□□ -0.69
SF3B3-202ENST00000562722 FMO3P31513 532 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 GNALP38405 381 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 ENTPD1P49961 510 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 GMFBP60983 142 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 IKZF1Q13422 519 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 PCK2Q16822 640 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 GFOD2Q3B7J2 385 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 HSP90B2PQ58FF3 399 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 TEX36Q5VZQ5 186 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 ASPHD2Q6ICH7 369 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 RPL13AP3Q6NVV1 102 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 PGBD2Q6P3X8 592 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 SLC36A1Q7Z2H8 476 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 DPY19L4Q7Z388 723 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 FGFRL1Q8N441 504 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 PIP4P2Q8N4L2 257 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 OR6K6Q8NGW6 343 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 FAM110DQ8TAY7 271 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-202ENST00000562722 NSMCE2Q96MF7 247 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 SEMA6AQ9H2E6 1030 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 SIRT7Q9NRC8 400 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 TBC1D23Q9NUY8 699 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 KPTNQ9Y664 436 aa10.71□□□□□ -0.69
SF3B3-202ENST00000562722 A0A1B0GW55 424 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 A0A1W2PRD5 423 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 A0A1W2PRF3 423 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 A0A1W2PRM7 423 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 ZNF878C9JN71 531 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 ZNF593O00488 134 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-202ENST00000562722 NDUFB3O43676 98 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 CLPXO76031 633 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 TSPAN15O95858 294 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 PAHP00439 452 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 LHBP01229 141 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 GYPBP06028 91 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 DUX4L2P0CJ85 424 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 DUX4L3P0CJ86 424 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 DUX4L4P0CJ87 422 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 DUX4L5P0CJ88 424 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 DUX4L6P0CJ89 424 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 DUX4L7P0CJ90 424 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 PSKH1P11801 424 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 MUC1P15941 1255 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-202ENST00000562722 HSD11B1P28845 292 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 OTX1P32242 354 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-202ENST00000562722 MSX2P35548 267 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-202ENST00000562722 DDOSTP39656 456 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 NAA10P41227 235 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-202ENST00000562722 SLC15A1P46059 708 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 CX3CR1P49238 355 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 PROK1P58294 105 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 PRB3Q04118 309 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-202ENST00000562722 C11orf91Q3C1V1 193 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 WDR38Q5JTN6 314 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 DUX4L9Q6RFH8 374 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-202ENST00000562722 C1QL4Q86Z23 238 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 FAM216BQ8N7L0 139 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 ZNF511Q8NB15 262 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 SLC37A3Q8NCC5 494 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 OR9Q2Q8NGE9 314 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 ZNRF4Q8WWF5 429 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 H1FXQ92522 213 aaKnown RBP10.7□□□□□ -0.7
SF3B3-202ENST00000562722 REEP6Q96HR9 211 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 RNPEPL1Q9HAU8 725 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 KAAG1Q9UBP8 84 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 DUX4Q9UBX2 424 aa10.7□□□□□ -0.7
SF3B3-202ENST00000562722 ARPC2O15144 300 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 FCN3O75636 299 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 PRDX6P30041 224 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 GRB2P62993 217 aaKnown RBP10.69□□□□□ -0.7
SF3B3-202ENST00000562722 CSNK2BP67870 215 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 ELF3P78545 371 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-202ENST00000562722 GUCA2AQ02747 115 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 CRMP1Q14194 572 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 EIF2B1Q14232 305 aaKnown RBP10.69□□□□□ -0.7
SF3B3-202ENST00000562722 C2orf68Q2NKX9 166 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 LRRC10Q5BKY1 277 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 Q6ZSV7 163 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 SLC16A9Q7RTY1 509 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 WDR86Q86TI4 376 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 ZSCAN4Q8NAM6 433 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-202ENST00000562722 OR1M1Q8NGA1 313 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 ELAC2Q9BQ52 826 aaKnown RBP10.69□□□□□ -0.7
SF3B3-202ENST00000562722 PAPOLGQ9BWT3 736 aaKnown RBP10.69□□□□□ -0.7
SF3B3-202ENST00000562722 SP140LQ9H930 580 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 IL1RAPQ9NPH3 570 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 DNAJC27Q9NZQ0 273 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 VPREB3Q9UKI3 123 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 TGP01266 2768 aa10.69□□□□□ -0.7
SF3B3-202ENST00000562722 ZNF816-ZNF321PA0A0X1KG74 233 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms