RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 MALLQ13021 153 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 OR8B8Q15620 311 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 ZNF829Q3KNS6 432 aaPredicted RBP8.31□□□□□ -1.08
CLK3-208ENST00000562626 BCL2L15Q5TBC7 163 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 WDR86Q86TI4 376 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 KLBQ86Z14 1044 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 C1orf174Q8IYL3 243 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 ZFP41Q8N8Y5 198 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 ZNF540Q8NDQ6 660 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 OR8G5Q8NG78 346 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 OR52H1Q8NGJ2 320 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 OR2G2Q8NGZ5 317 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 RGP1Q92546 391 aaPredicted RBP8.31□□□□□ -1.08
CLK3-208ENST00000562626 FAM71F1Q96KD3 344 aaPredicted RBP8.31□□□□□ -1.08
CLK3-208ENST00000562626 SLC30A2Q9BRI3 323 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 OR10A2Q9H208 303 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 DUSP21Q9H596 190 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 TREM2Q9NZC2 230 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 CNOT2Q9NZN8 540 aaKnown RBP8.31□□□□□ -1.08
CLK3-208ENST00000562626 GPR160Q9UJ42 338 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 PCDHGB1Q9Y5G3 927 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 SNX5Q9Y5X3 404 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 PMF1-BGLAPU3KQ54 211 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 ZANQ9Y493 2812 aa8.31□□□□□ -1.08
CLK3-208ENST00000562626 A0A0U1RQV5 110 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 EFCAB10A6NFE3 127 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 TRIM64A6NGJ6 449 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 GGT3PA6NGU5 568 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 TRIM64BA6NI03 449 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 VSTM5A8MXK1 200 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 F5H5P2 479 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 APOC1P02654 83 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 TUBG1P23258 451 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 CA6P23280 308 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 EFNA4P52798 201 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 IRF3Q14653 427 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 FDX2Q6P4F2 183 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 UNQ6126/PRO20091Q6UXV3 157 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 FAM220AQ7Z4H9 259 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 LRRC75A-AS1Q8N1F1 130 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 SYS1Q8N2H4 156 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 ZNF786Q8N393 782 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 PLPP7Q8NBV4 271 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 OR2Z1Q8NG97 314 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 OR51A4Q8NGJ6 313 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 OR14K1Q8NGZ2 314 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 ITLN1Q8WWA0 313 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 GATAD2BQ8WXI9 593 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 COG8Q96MW5 612 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 OR5M11Q96RB7 305 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 TUBG2Q9NRH3 451 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 INPP5EQ9NRR6 644 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 LSM2Q9Y333 95 aaKnown RBP8.3□□□□□ -1.08
CLK3-208ENST00000562626 RHBDD3Q9Y3P4 386 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 F8P00451 2351 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 HIVEP1P15822 2718 aa8.3□□□□□ -1.08
CLK3-208ENST00000562626 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 LOC100289279A0A1B0GTE1 492 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 LOC107986453A0A1B0GWG9 222 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 ACOD1A6NK06 481 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 CDC14BO60729 498 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 RP2O75695 350 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 F12P00748 615 aaPredicted RBP8.29□□□□□ -1.08
CLK3-208ENST00000562626 ADH4P08319 380 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 CCDC159P0C7I6 412 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 FAHP16930 419 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 CCL1P22362 96 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 PMELP40967 661 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 MAP2K4P45985 399 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 SELENOVP59797 346 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 ACTA2P62736 377 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 ACTG2P63267 376 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 MAB21L1Q13394 359 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 ALKBH1Q13686 389 aaKnown RBP8.29□□□□□ -1.08
CLK3-208ENST00000562626 PRAMEF6Q5VXH4 476 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 Q6ZSR3 168 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 CIARTQ8N365 385 aaPredicted RBP8.29□□□□□ -1.08
CLK3-208ENST00000562626 STX19Q8N4C7 294 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 NANOGP1Q8N7R0 232 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 OR13C5Q8NGS8 318 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 RPS4Y2Q8TD47 263 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 HPSE2Q8WWQ2 592 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 ELMOD3Q96FG2 381 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 Q96MF0 132 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 PDCD1LG2Q9BQ51 273 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 RAB1BQ9H0U4 201 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 MS4A5Q9H3V2 200 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 MOB1AQ9H8S9 216 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 CAB39Q9Y376 341 aaPredicted RBP8.29□□□□□ -1.08
CLK3-208ENST00000562626 EXOSC1Q9Y3B2 195 aaKnown RBP8.29□□□□□ -1.08
CLK3-208ENST00000562626 V9GYS6 101 aa8.29□□□□□ -1.08
CLK3-208ENST00000562626 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.28□□□□□ -1.084e-6■■□□□ 13.3
CLK3-208ENST00000562626 A0A096LNT2 108 aa8.28□□□□□ -1.08
CLK3-208ENST00000562626 PLSCR5A0PG75 271 aa8.28□□□□□ -1.08
CLK3-208ENST00000562626 IRGMA1A4Y4 181 aa8.28□□□□□ -1.08
CLK3-208ENST00000562626 ZNF850A8MQ14 1090 aa8.28□□□□□ -1.08
CLK3-208ENST00000562626 WNT9BO14905 357 aa8.28□□□□□ -1.08
CLK3-208ENST00000562626 ZFPL1O95159 310 aa8.28□□□□□ -1.08
CLK3-208ENST00000562626 MT-ND5P03915 603 aa8.28□□□□□ -1.08
CLK3-208ENST00000562626 CD55P08174 381 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms