RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 DEFB108BQ8NET1 73 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 STMN2Q93045 179 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 DACT3Q96B18 629 aaPredicted RBP17.29■□□□□ 0.36
TPM1-232ENST00000561425 CENPNQ96H22 339 aaPredicted RBP17.29■□□□□ 0.36
TPM1-232ENST00000561425 OR10A2Q9H208 303 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 MIOXQ9UGB7 285 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 LRCH1Q9Y2L9 728 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 N6AMT1Q9Y5N5 214 aa17.29■□□□□ 0.36
TPM1-232ENST00000561425 LOC105371242A0A075B767 164 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 A0A0A6YYJ9 748 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 TBX1O43435 398 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 ZNF205O95201 554 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 DCTDP32321 178 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 GSK3AP49840 483 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 HCCSP53701 268 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 ROM1Q03395 351 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 TIGD6Q17RP2 521 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.28■□□□□ 0.36
TPM1-232ENST00000561425 C11orf53Q8IXP5 236 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 OR11L1Q8NGX0 322 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 PRRG3Q9BZD7 231 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 C7orf69Q9H7B7 122 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 FN3KRPQ9HA64 309 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 HAO2Q9NYQ3 351 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 RNF7Q9UBF6 113 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 INSIG2Q9Y5U4 225 aa17.28■□□□□ 0.36
TPM1-232ENST00000561425 ACOD1A6NK06 481 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 ANKRD30BLA7E2S9 258 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 TCF21O43680 179 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 LHBP01229 141 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 PSMB10P40306 273 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 PSMA6P60900 246 aaKnown RBP17.27■□□□□ 0.36
TPM1-232ENST00000561425 RPS7P62081 194 aaKnown RBP17.27■□□□□ 0.36
TPM1-232ENST00000561425 MZT1Q08AG7 82 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 LIPNQ5VXI9 398 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 NXNL2Q5VZ03 156 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 ZFP1Q6P2D0 407 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 LRRN1Q6UXK5 716 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 ZNF841Q6ZN19 808 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 MEPCEQ7L2J0 689 aaKnown RBP17.27■□□□□ 0.36
TPM1-232ENST00000561425 TMEM163Q8TC26 289 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 ITFG2Q969R8 447 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 LYZL4Q96KX0 146 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 OSBPL10Q9BXB5 764 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 UFSP2Q9NUQ7 469 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 DNAJC27Q9NZQ0 273 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 ENOPH1Q9UHY7 261 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 ZNF391Q9UJN7 358 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 LAMP5Q9UJQ1 280 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 LRP12Q9Y561 859 aa17.27■□□□□ 0.36
TPM1-232ENST00000561425 PRR32B1ATL7 298 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 IRF2P14316 349 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 SRSF2Q01130 221 aaKnown RBP17.26■□□□□ 0.35
TPM1-232ENST00000561425 PAX8Q06710 450 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 ZNF154Q13106 437 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 ESCO2Q56NI9 601 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 LCN1P1Q5VSP4 162 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 DCDC5Q6ZRR9 648 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 WDR86Q86TI4 376 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 TCEANCQ8N8B7 351 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 CSNK2A3Q8NEV1 391 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 NANPQ8TBE9 248 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 PYDC1Q8WXC3 89 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 DVL3Q92997 716 aaPredicted RBP17.26■□□□□ 0.35
TPM1-232ENST00000561425 PGAM5Q96HS1 289 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 CIB1Q99828 191 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 GABARAPL3Q9BY60 117 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 C14orf119Q9NWQ9 140 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 OAZ3Q9UMX2 235 aa17.26■□□□□ 0.35
TPM1-232ENST00000561425 ARHGAP32A7KAX9 2087 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.25■□□□□ 0.35
TPM1-232ENST00000561425 ZNF254O75437 659 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 IGLV3-1P01715 115 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 POLR2IP36954 125 aaKnown RBP17.25■□□□□ 0.35
TPM1-232ENST00000561425 CFHR2P36980 270 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 SCGB2A2Q13296 93 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 KCTD18Q6PI47 426 aaPredicted RBP17.25■□□□□ 0.35
TPM1-232ENST00000561425 USP43Q70EL4 1123 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 BCDIN3DQ7Z5W3 292 aaKnown RBP17.25■□□□□ 0.35
TPM1-232ENST00000561425 OR8B12Q8NGG6 310 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 ASB17Q8WXJ9 295 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 NEIL1Q96FI4 390 aaPredicted RBP17.25■□□□□ 0.35
TPM1-232ENST00000561425 OR8B4Q96RC9 309 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 SSBP3Q9BWW4 388 aaPredicted RBP17.25■□□□□ 0.35
TPM1-232ENST00000561425 TLNRD1Q9H1K6 362 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 SEMA6AQ9H2E6 1030 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 FAM206AQ9NX38 181 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 COPS3Q9UNS2 423 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 RHBDD3Q9Y3P4 386 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 TMEM14AQ9Y6G1 99 aa17.25■□□□□ 0.35
TPM1-232ENST00000561425 SLC22A31A6NKX4 558 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 E9PQ18 207 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 H3BNX3 289 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 LGALS8O00214 317 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 CST4P01036 141 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 RPS2P15880 293 aaKnown RBP17.24■□□□□ 0.35
TPM1-232ENST00000561425 EPHA1P21709 976 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 ACKR3P25106 362 aa17.24■□□□□ 0.35
TPM1-232ENST00000561425 ELF3P78545 371 aaPredicted RBP17.24■□□□□ 0.35
TPM1-232ENST00000561425 SNCBQ16143 134 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms