RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	OR6K3	Q8NGY3	331 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	AKR7L	Q8NHP1	331 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	LGALS14	Q8TCE9	139 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC7A6	Q92536	515 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	DIRAS2	Q96HU8	199 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	CITED4	Q96RK1	184 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	CCDC32	Q9BV29	185 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	GPR84	Q9NQS5	396 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF275	Q9NSD4	429 aa	Predicted RBP	6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	ABRACL	Q9P1F3	81 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF319	Q9P2F9	582 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	FOXJ3	Q9UPW0	622 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395		V9GY05	133 aa		6.54	□□□□□ -1.36
TPM1-231	ENST00000561395	HRNR	Q86YZ3	2850 aa	Predicted RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	STAB1	Q9NY15	2570 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395		A0A096LPE4	126 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395		A0A0B4J203	849 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395		A0A1W2PPZ6	126 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	C5orf63	A6NC05	138 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	MBD3L4	A6NDZ8	208 aa	Predicted RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	MBD3L3	A6NE82	208 aa	Predicted RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	MBD3L5	A6NJ08	208 aa	Predicted RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	FAM25A	B3EWG3	89 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	FAM25C	B3EWG5	89 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	FAM25G	B3EWG6	89 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	WDR1	O75083	606 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	CLDN14	O95500	239 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	CNOT4	O95628	575 aa	Known RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	PAH	P00439	452 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	HLA-H	P01893	362 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	MAS1	P04201	325 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	EIF4E	P06730	217 aa	Known RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	COX5B	P10606	129 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	GABRA1	P14867	456 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	ABO	P16442	354 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF12	P17014	697 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF20	P17024	532 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	ELK1	P19419	428 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	PTBP1	P26599	531 aa	Known RBP eCLIP	6.53	□□□□□ -1.36	7e-7	■■■□□ 17
TPM1-231	ENST00000561395	DDOST	P39656	456 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	KIR2DL2	P43627	348 aa	Predicted RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	EVX1	P49640	407 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	IFITM3	Q01628	133 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	HGFAC	Q04756	655 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF79	Q15937	498 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF181	Q2M3W8	571 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	GFOD2	Q3B7J2	385 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	PABPC1L2A	Q5JQF8	200 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	UBE2NL	Q5JXB2	153 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	C1orf185	Q5T7R7	199 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	HES5	Q5TA89	166 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	RTL6	Q6ICC9	239 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF529	Q6P280	563 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	TMEM53	Q6P2H8	277 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	METAP1D	Q6UB28	335 aa	Predicted RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	FAM131A	Q6UXB0	335 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	MEX3B	Q6ZN04	569 aa	Known RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395		Q6ZSR3	168 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	DPPA2	Q7Z7J5	298 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	NAA40	Q86UY6	237 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	CD163	Q86VB7	1156 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	COMMD2	Q86X83	199 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	SNX29P2	Q8IUI4	249 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	SAMD12	Q8N8I0	201 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	CNEP1R1	Q8N9A8	125 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	CCDC54	Q8NEL0	328 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	DNAAF1	Q8NEP3	725 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	OR52H1	Q8NGJ2	320 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	OR1J2	Q8NGS2	313 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	OR5H6	Q8NGV6	325 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	OR14K1	Q8NGZ2	314 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	CA5BP1	Q8WTZ4	195 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	BCL2L2	Q92843	193 aa	Predicted RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	FGGY	Q96C11	551 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	ADAT3	Q96EY9	351 aa	Predicted RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	LYZL4	Q96KX0	146 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	SDHC	Q99643	169 aa	Predicted RBP	6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	SPOCK3	Q9BQ16	436 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	SOST	Q9BQB4	213 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	MRI1	Q9BV20	369 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	SRR	Q9GZT4	340 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	OR10A2	Q9H208	303 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	CXXC4	Q9H2H0	198 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	RNF121	Q9H920	327 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	SP140L	Q9H930	580 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	NOX3	Q9HBY0	568 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	DLL4	Q9NR61	685 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	CYSLTR2	Q9NS75	346 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	SPATA2	Q9UM82	520 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	N6AMT1	Q9Y5N5	214 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	NBEAL1	Q6ZS30	2694 aa		6.53	□□□□□ -1.36
TPM1-231	ENST00000561395	MEGF11	A6BM72	1044 aa		6.52	□□□□□ -1.37
TPM1-231	ENST00000561395	ZNF503-AS2	A6NEH8	195 aa		6.52	□□□□□ -1.37
TPM1-231	ENST00000561395	FABP12	A6NFH5	140 aa		6.52	□□□□□ -1.37
TPM1-231	ENST00000561395	FIGNL2	A6NMB9	653 aa		6.52	□□□□□ -1.37
TPM1-231	ENST00000561395	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	6.52	□□□□□ -1.37
TPM1-231	ENST00000561395	SLC17A2	O00624	439 aa		6.52	□□□□□ -1.37
TPM1-231	ENST00000561395	TBX1	O43435	398 aa		6.52	□□□□□ -1.37
TPM1-231	ENST00000561395	TNFSF13	O75888	250 aa		6.52	□□□□□ -1.37

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