RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 DEFA6Q01524 100 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 TAF13Q15543 124 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 KCNJ8Q15842 424 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 PCK2Q16822 640 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 CD276Q5ZPR3 534 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 RPL13AP3Q6NVV1 102 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 DUX4L9Q6RFH8 374 aaPredicted RBP9.62□□□□□ -0.87
USP3-220ENST00000561381 RASSF6Q6ZTQ3 369 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 BTN2A1Q7KYR7 527 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 WDR86Q86TI4 376 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 C11orf53Q8IXP5 236 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 PDZD9Q8IXQ8 264 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 DEFB107AQ8IZN7 70 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 AQP11Q8NBQ7 271 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 WFDC12Q8WWY7 111 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 LHX4Q969G2 390 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 WDFY2Q96P53 400 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 KCNJ15Q99712 375 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 TSSK6Q9BXA6 273 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 SIRPDQ9H106 197 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 NOX4Q9NPH5 578 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 TBC1D23Q9NUY8 699 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 ARMC1Q9NVT9 282 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 VNN3Q9NY84 501 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 PDP1Q9P0J1 537 aaPredicted RBP9.62□□□□□ -0.87
USP3-220ENST00000561381 DUX4Q9UBX2 424 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 TAGLN3Q9UI15 199 aa9.62□□□□□ -0.87
USP3-220ENST00000561381 WNK1Q9H4A3 2382 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 IGHV1-69DA0A0B4J2H0 117 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 DHRS12A0PJE2 317 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 TBX1O43435 398 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 KRT36O76013 467 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 CCNB2O95067 398 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 LHBP01229 141 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 IGHV1-69P01742 117 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 CRYBA1P05813 215 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 LIPFP07098 398 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 SPI1P17947 270 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 FMO3P31513 532 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 BPIFB3P59826 476 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 KRTAP10-3P60369 221 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 CSNK2BP67870 215 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 PRB3Q04118 309 aaPredicted RBP9.61□□□□□ -0.87
USP3-220ENST00000561381 METTL11BQ5VVY1 283 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 PNLDC1Q8NA58 520 aaKnown RBP9.61□□□□□ -0.87
USP3-220ENST00000561381 SPERTQ8NA61 448 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 OR6K6Q8NGW6 343 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 OR4F5Q8NH21 305 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 GATAD2BQ8WXI9 593 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 SPSB4Q96A44 273 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 SEH1LQ96EE3 360 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 NMNAT2Q9BZQ4 307 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 TRIM15Q9C019 465 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 ACOXLQ9NUZ1 547 aa9.61□□□□□ -0.87
USP3-220ENST00000561381 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.6□□□□□ -0.87
USP3-220ENST00000561381 A0A0U1RQK1 487 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 TCRBV5S2A0A599 114 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 ZNF878C9JN71 531 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 XRCC2O43543 280 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 NDUFA2O43678 99 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 IGHV4-59P01825 116 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 ANXA2P07355 339 aaKnown RBP9.6□□□□□ -0.87
USP3-220ENST00000561381 MAGEA2P43356 314 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 CX3CR1P49238 355 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 SLC25A1P53007 311 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 FAM3AP98173 230 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 EIF2B1Q14232 305 aaKnown RBP9.6□□□□□ -0.87
USP3-220ENST00000561381 KLHL12Q53G59 568 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 TEX30Q5JUR7 227 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 LINC01590Q5TEZ4 76 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 TEX36Q5VZQ5 186 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 OLFML2AQ68BL7 652 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 SLC16A9Q7RTY1 509 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 PRSS45Q7RTY3 260 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 CPLX4Q7Z7G2 160 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 SVOPQ8N4V2 548 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 OR8S1Q8NH09 359 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 LRRC29Q8WV35 223 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 ST8SIA4Q92187 359 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 SGK3Q96BR1 496 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 FAM71F1Q96KD3 344 aaPredicted RBP9.6□□□□□ -0.87
USP3-220ENST00000561381 AMELYQ99218 206 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 CCL13Q99616 98 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 MED20Q9H944 212 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 BEX1Q9HBH7 125 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 TRIM36Q9NQ86 728 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 C14orf119Q9NWQ9 140 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 DNAJC27Q9NZQ0 273 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 KIF17Q9P2E2 1029 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 ZNF319Q9P2F9 582 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 RPUSD1Q9UJJ7 312 aaKnown RBP9.6□□□□□ -0.87
USP3-220ENST00000561381 U3KQV3 271 aa9.6□□□□□ -0.87
USP3-220ENST00000561381 hCG_38984A0A1B0GV85 526 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 FAM183AA6NL82 134 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 ANKRD30BLA7E2S9 258 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.59□□□□□ -0.87
USP3-220ENST00000561381 NDUFA7O95182 113 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 AMY2BP19961 511 aa9.59□□□□□ -0.87
USP3-220ENST00000561381 GYS2P54840 703 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms