RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SF3A3Q12874 501 aaKnown RBP eCLIP2.88□□□□□ -1.95
HERC1-211ENST00000560983 RBM39Q14498 530 aaKnown RBP2.88□□□□□ -1.95
HERC1-211ENST00000560983 MPPED2Q15777 294 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 FAM83EQ2M2I3 478 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 MRGPRG-AS1Q2M3A8 158 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 LDLRAD2Q5SZI1 272 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 RNLSQ5VYX0 342 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 NCR3LG1Q68D85 454 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 SNX32Q86XE0 403 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 ARMC8Q8IUR7 673 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 LRRC18Q8N456 261 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 FAM71E2Q8N5Q1 922 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 VPS37AQ8NEZ2 397 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 OR5M8Q8NGP6 311 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 OR13G1Q8NGZ3 307 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 AKR7LQ8NHP1 331 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 METTL6Q8TCB7 284 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 ST8SIA4Q92187 359 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 MAGOHBQ96A72 148 aaKnown RBP2.88□□□□□ -1.95
HERC1-211ENST00000560983 PPCDCQ96CD2 204 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 RNFT2Q96EX2 444 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 SLC41A3Q96GZ6 507 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 TEX37Q96LM6 180 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 TSSK3Q96PN8 268 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 KCNA7Q96RP8 456 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 CPNE1Q99829 537 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 TMEM120AQ9BXJ8 343 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 MMADHCQ9H3L0 296 aaPredicted RBP2.88□□□□□ -1.95
HERC1-211ENST00000560983 PPP1R3EQ9H7J1 279 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 RETNQ9HD89 108 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 ZFP57Q9NU63 452 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 GLTPQ9NZD2 209 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 KAAG1Q9UBP8 84 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 BAIAP2L1Q9UHR4 511 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 STARD10Q9Y365 291 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 CCL27Q9Y4X3 112 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 TIMM22Q9Y584 194 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 IGKV1D-42A0A075B6H8 117 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 A0A087WUJ7 227 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 OOEPA6NGQ2 149 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 FAM159BA6NKW6 160 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 DUXAA6NLW8 204 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 FAM90A22PA8MWA6 464 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 M0R1W7 72 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 DNALI1O14645 258 aaPredicted RBP2.87□□□□□ -1.95
HERC1-211ENST00000560983 AIM2O14862 343 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 RTL8CO15255 209 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 FARS2O95363 451 aaKnown RBP2.87□□□□□ -1.95
HERC1-211ENST00000560983 AHSA1O95433 338 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 AK1P00568 194 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 IGLV2-11P01706 119 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 HLA-DQA2P01906 255 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 HLA-DPB1P04440 258 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 KRT16P08779 473 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 SNRPAP09012 282 aaKnown RBP2.87□□□□□ -1.95
HERC1-211ENST00000560983 TPM1P09493 284 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 G6PDP11413 515 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 PRG2P13727 222 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 IRF2P14316 349 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 ZNF32P17041 273 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 CBLP22681 906 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 TUBG1P23258 451 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 SSTR1P30872 391 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 SPRP35270 261 aaPredicted RBP2.87□□□□□ -1.95
HERC1-211ENST00000560983 CSNK1A1P48729 337 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 INSL3P51460 131 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 ARHGDIAP52565 204 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 HSF2Q03933 536 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 NAB1Q13506 487 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 KIR2DS1Q14954 304 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 KCNJ8Q15842 424 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 HIST3H3Q16695 136 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 DEFB136Q30KP8 78 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 UNC50Q53HI1 259 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 FAM27D1Q5T7N8 215 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 GRTP1Q5TC63 336 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 ATG16L1Q676U5 607 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 CCDC137Q6PK04 289 aaKnown RBP2.87□□□□□ -1.95
HERC1-211ENST00000560983 CEMP1Q6PRD7 247 aaPredicted RBP2.87□□□□□ -1.95
HERC1-211ENST00000560983 UNQ6126/PRO20091Q6UXV3 157 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 CYS1Q717R9 158 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 C6orf120Q7Z4R8 191 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 PXKQ7Z7A4 578 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 LHFPL4Q7Z7J7 247 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 SMIM29Q86T20 159 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 ZNF695Q8IW36 515 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 OR5AS1Q8N127 324 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 PDIK1LQ8N165 341 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 CLEC4FQ8N1N0 589 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 OSR2Q8N2R0 312 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 FBXO36Q8NEA4 188 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 OR8G5Q8NG78 346 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 TMED6Q8WW62 240 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 OR5P2Q8WZ92 322 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 PTP4A1Q93096 173 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 MCHR2Q969V1 340 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 ERGIC1Q969X5 290 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 FAM110AQ9BQ89 295 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 SLC25A33Q9BSK2 321 aa2.87□□□□□ -1.95
HERC1-211ENST00000560983 WNT5BQ9H1J7 359 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms