RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 AP3M1Q9Y2T2 418 aa15.12■□□□□ 0.01
TPM1-226ENST00000560959 SF3B6Q9Y3B4 125 aaKnown RBP15.12■□□□□ 0.01
TPM1-226ENST00000560959 A0A1W2PRD5 423 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 A0A1W2PRF3 423 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 A0A1W2PRM7 423 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 TIPRLO75663 272 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 RENP00797 406 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 NAA10P41227 235 aaPredicted RBP15.11■□□□□ 0.01
TPM1-226ENST00000560959 KLRD1Q13241 179 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 GLYATL3Q5SZD4 288 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 SMARCD3Q6STE5 483 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 CBLL1Q75N03 491 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 NDUFA11Q86Y39 141 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 FAM216BQ8N7L0 139 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 WFDC9Q8NEX5 89 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 OR51G2Q8NGK0 314 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 LRRC29Q8WV35 223 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 DYDC1Q8WWB3 177 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 RSRC1Q96IZ7 334 aaKnown RBP15.11■□□□□ 0.01
TPM1-226ENST00000560959 MAP6Q96JE9 813 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 ERMAPQ96PL5 475 aaPredicted RBP15.11■□□□□ 0.01
TPM1-226ENST00000560959 NPFFR1Q9GZQ6 430 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 TOR3AQ9H497 397 aa15.11■□□□□ 0.01
TPM1-226ENST00000560959 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.1■□□□□ 0.01
TPM1-226ENST00000560959 ACOT8O14734 319 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 MRASO14807 208 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 AMY2BP19961 511 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 BLMHQ13867 455 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 LRRC75BQ2VPJ9 315 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 FOXB2Q5VYV0 432 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 WDR82Q6UXN9 313 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 OR1M1Q8NGA1 313 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 OR56B2PQ8NGI1 322 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 OR9Q1Q8NGQ5 310 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 OR8S1Q8NH09 359 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 OR2AE1Q8NHA4 323 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 SPSB4Q96A44 273 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 ITPKCQ96DU7 683 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 NMNAT3Q96T66 252 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 MMP28Q9H239 520 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 KRCC1Q9NPI7 259 aaPredicted RBP15.1■□□□□ 0.01
TPM1-226ENST00000560959 DNAJB11Q9UBS4 358 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 ENPP4Q9Y6X5 453 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 TENM3Q9P273 2699 aa15.1■□□□□ 0.01
TPM1-226ENST00000560959 UNC119BA6NIH7 251 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 ANKRD30BLA7E2S9 258 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 FBXO24O75426 580 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 VSIG10L2P0DP72 767 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 TROVE2P10155 538 aaKnown RBP eCLIP15.09■□□□□ 0.01
TPM1-226ENST00000560959 NOS3P29474 1203 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 DLX1P56177 255 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 ELF3P78545 371 aaPredicted RBP15.09■□□□□ 0.01
TPM1-226ENST00000560959 PRB3Q04118 309 aaPredicted RBP15.09■□□□□ 0.01
TPM1-226ENST00000560959 IKZF1Q13422 519 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 NSUN5P1Q3KNT7 163 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 STUMQ69YW2 141 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 FKBP9P1Q75LS8 142 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 DPY19L4Q7Z388 723 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 PNKDQ8N490 385 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 CYB561A3Q8NBI2 242 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 OR5D13Q8NGL4 314 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 OR4C15Q8NGM1 316 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 R3HDM4Q96D70 268 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 MED30Q96HR3 178 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 AJUBAQ96IF1 538 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 TMEM120AQ9BXJ8 343 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 TLNRD1Q9H1K6 362 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 COL7A1Q02388 2944 aa15.09■□□□□ 0.01
TPM1-226ENST00000560959 XRCC2O43543 280 aa15.08■□□□□ 0
TPM1-226ENST00000560959 ZNF682O95780 498 aa15.08■□□□□ 0
TPM1-226ENST00000560959 HLA-DQA2P01906 255 aa15.08■□□□□ 0
TPM1-226ENST00000560959 H1F0P07305 194 aaKnown RBP15.08■□□□□ 0
TPM1-226ENST00000560959 VSIG8P0DPA2 414 aa15.08■□□□□ 0
TPM1-226ENST00000560959 CAV3P56539 151 aa15.08■□□□□ 0
TPM1-226ENST00000560959 MAPRE2Q15555 327 aa15.08■□□□□ 0
TPM1-226ENST00000560959 LY6EQ16553 131 aa15.08■□□□□ 0
TPM1-226ENST00000560959 WDR86Q86TI4 376 aa15.08■□□□□ 0
TPM1-226ENST00000560959 Q8N2B8 174 aa15.08■□□□□ 0
TPM1-226ENST00000560959 RPRD1BQ9NQG5 326 aaKnown RBP15.08■□□□□ 0
TPM1-226ENST00000560959 MRPL22Q9NWU5 206 aaKnown RBP15.08■□□□□ 0
TPM1-226ENST00000560959 HAO2Q9NYQ3 351 aa15.08■□□□□ 0
TPM1-226ENST00000560959 ADA2Q9NZK5 511 aa15.08■□□□□ 0
TPM1-226ENST00000560959 CAPN7Q9Y6W3 813 aa15.08■□□□□ 0
TPM1-226ENST00000560959 IDH3BO43837 385 aa15.07■□□□□ 0
TPM1-226ENST00000560959 HIST1H1CP16403 213 aaKnown RBP15.07■□□□□ 0
TPM1-226ENST00000560959 ZNF823P16415 610 aa15.07■□□□□ 0
TPM1-226ENST00000560959 FAHP16930 419 aa15.07■□□□□ 0
TPM1-226ENST00000560959 SLC6A6P31641 620 aa15.07■□□□□ 0
TPM1-226ENST00000560959 HCP5Q6MZN7 132 aa15.07■□□□□ 0
TPM1-226ENST00000560959 ZNF788Q6ZQV5 615 aa15.07■□□□□ 0
TPM1-226ENST00000560959 PAPD5Q8NDF8 572 aaKnown RBP15.07■□□□□ 0
TPM1-226ENST00000560959 WIPF2Q8TF74 440 aaPredicted RBP15.07■□□□□ 0
TPM1-226ENST00000560959 H1FXQ92522 213 aaKnown RBP15.07■□□□□ 0
TPM1-226ENST00000560959 HSH2DQ96JZ2 352 aa15.07■□□□□ 0
TPM1-226ENST00000560959 CDCA4Q9BXL8 241 aa15.07■□□□□ 0
TPM1-226ENST00000560959 SERTAD4Q9NUC0 356 aa15.07■□□□□ 0
TPM1-226ENST00000560959 A0A0G2JND7 137 aa15.06■□□□□ 0
TPM1-226ENST00000560959 MEGF11A6BM72 1044 aa15.06■□□□□ 0
TPM1-226ENST00000560959 OR6C68A6NDL8 312 aa15.06■□□□□ 0
TPM1-226ENST00000560959 MPIG6BO95866 241 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms