RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 IRF2P14316 349 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 RPS2P15880 293 aaKnown RBP12.3□□□□□ -0.44
IDH3A-219ENST00000560414 SLC2A5P22732 501 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 GATA3P23771 443 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 RASSF2P50749 326 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 HCCSP53701 268 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 FAM3AP98173 230 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 SNAPC1Q16533 368 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 TIGD6Q17RP2 521 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 GFOD2Q3B7J2 385 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 ESCO2Q56NI9 601 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 FAHD1Q6P587 224 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 SLC16A9Q7RTY1 509 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 C1QL2Q7Z5L3 287 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 C1orf87Q8N0U7 546 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 DEFB108BQ8NET1 73 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 OR5K1Q8NHB7 308 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 OTOSQ8NHW6 89 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 Q8TCH9 128 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 SPSB4Q96A44 273 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 REEP6Q96HR9 211 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 SLC22A4Q9H015 551 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 MRPL15Q9P015 296 aaKnown RBP12.3□□□□□ -0.44
IDH3A-219ENST00000560414 PPIAL4AQ9Y536 164 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 PPIAL4CA0A0B4J2A2 164 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 A8MXK9 166 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 M0R129 80 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 PRODHO43272 600 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 GMDSO60547 372 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 ATP5HO75947 161 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 GRPP07492 148 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 LYNP07948 512 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 APOFQ13790 326 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 PTGES3Q15185 160 aaKnown RBP12.29□□□□□ -0.44
IDH3A-219ENST00000560414 ATP6AP1Q15904 470 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 ZNF404Q494X3 552 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 C1orf146Q5VVC0 180 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 LYPD2Q6UXB3 125 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 AMIGO2Q86SJ2 522 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 KLBQ86Z14 1044 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.29□□□□□ -0.44
IDH3A-219ENST00000560414 BOLLQ8N9W6 283 aaKnown RBP12.29□□□□□ -0.44
IDH3A-219ENST00000560414 OR11L1Q8NGX0 322 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 NANPQ8TBE9 248 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 ERGIC1Q969X5 290 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 TEX12Q9BXU0 123 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 OPA3Q9H6K4 179 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 PPP1R3EQ9H7J1 279 aa12.29□□□□□ -0.44
IDH3A-219ENST00000560414 POLR3KQ9Y2Y1 108 aaPredicted RBP12.29□□□□□ -0.44
IDH3A-219ENST00000560414 NOP16Q9Y3C1 178 aaKnown RBP12.29□□□□□ -0.44
IDH3A-219ENST00000560414 PTBP3O95758 552 aaKnown RBP12.28□□□□□ -0.44
IDH3A-219ENST00000560414 APOC1P02654 83 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 MRPL3P09001 348 aaKnown RBP12.28□□□□□ -0.44
IDH3A-219ENST00000560414 ZNF12P17014 697 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 EPHA2P29317 976 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 ZNF154Q13106 437 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 SLC35D3Q5M8T2 416 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 SFRP4Q6FHJ7 346 aaPredicted RBP12.28□□□□□ -0.44
IDH3A-219ENST00000560414 LRRN1Q6UXK5 716 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 ZNF826PQ6ZT77 177 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 RHOUQ7L0Q8 258 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 BCDIN3DQ7Z5W3 292 aaKnown RBP12.28□□□□□ -0.44
IDH3A-219ENST00000560414 PARP8Q8N3A8 854 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 TEX29Q8N6K0 151 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 DNAJC9Q8WXX5 260 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 C22orf15Q8WYQ4 148 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 PGAM5Q96HS1 289 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 SSBP3Q9BWW4 388 aaPredicted RBP12.28□□□□□ -0.44
IDH3A-219ENST00000560414 OR10A2Q9H208 303 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 SP140LQ9H930 580 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 FN3KRPQ9HA64 309 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 C1orf123Q9NWV4 160 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 RNF7Q9UBF6 113 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 MIOXQ9UGB7 285 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 LRCH1Q9Y2L9 728 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 AP4S1Q9Y587 144 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 INSIG2Q9Y5U4 225 aa12.28□□□□□ -0.44
IDH3A-219ENST00000560414 hCG_38984A0A1B0GV85 526 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 CCDC182A6NF36 153 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 A6NLC8 198 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 ANKRD30BLA7E2S9 258 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 G3V2T6 193 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 PSMD9O00233 223 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 PRKYO43930 277 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 FSHBP01225 129 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 ALOX5APP20292 161 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 FASP25445 335 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 CD80P33681 288 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 DDOSTP39656 456 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 GSK3AP49840 483 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 GNB2P62879 340 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 SCGB2A2Q13296 93 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 SEMA6DQ8NFY4 1073 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 OR52H1Q8NGJ2 320 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 ZNF418Q8TF45 676 aaPredicted RBP12.27□□□□□ -0.45
IDH3A-219ENST00000560414 LRTOMTQ8WZ04 291 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 NEIL1Q96FI4 390 aaPredicted RBP12.27□□□□□ -0.45
IDH3A-219ENST00000560414 TEAD3Q99594 435 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 SLC6A7Q99884 636 aa12.27□□□□□ -0.45
IDH3A-219ENST00000560414 MMADHCQ9H3L0 296 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms