RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ONECUT2O95948 504 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 HPP00738 406 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 HOXD4P09016 255 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-216ENST00000559819 CCL4P13236 92 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 MGMTP16455 207 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 PI3P19957 117 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 MPZP25189 248 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 SRSF4Q08170 494 aaKnown RBP8.84□□□□□ -0.99
LRRC28-216ENST00000559819 RAET1LQ5VY80 246 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 FAM219AQ8IW50 185 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 KCNRGQ8N5I3 272 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 DTWD2Q8NBA8 298 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 BVESQ8NE79 360 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 ASB13Q8WXK3 278 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 ROBO4Q8WZ75 1007 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 SLC26A1Q9H2B4 701 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 MED9Q9NWA0 146 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 HDGFL3Q9Y3E1 203 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 PTRH2Q9Y3E5 179 aaKnown RBP8.84□□□□□ -0.99
LRRC28-216ENST00000559819 SESN1Q9Y6P5 492 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 A8MXK9 166 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 TP53I11O14683 189 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 FGF2P09038 288 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 DBHP09172 617 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 UBBP0CG47 229 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 SLC25A4P12235 298 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 HIST1H1DP16402 221 aaKnown RBP8.84□□□□□ -0.99
LRRC28-216ENST00000559819 SLC6A9P48067 706 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 CSNK1A1P48729 337 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 RPS27AP62979 156 aaKnown RBP8.84□□□□□ -0.99
LRRC28-216ENST00000559819 UBA52P62987 128 aaKnown RBP8.84□□□□□ -0.99
LRRC28-216ENST00000559819 SLC35A1P78382 337 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 FGL1Q08830 312 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 BAMBIQ13145 260 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 BTN1A1Q13410 526 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 LPCAT3Q6P1A2 487 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 CRIP3Q6Q6R5 217 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 DOK3Q7L591 496 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 MR1Q95460 341 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 PHB2Q99623 299 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 ZNF471Q9BX82 626 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-216ENST00000559819 GAREM1Q9H706 876 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 FBLN5Q9UBX5 448 aa8.84□□□□□ -0.99
LRRC28-216ENST00000559819 IGHV1-45A0A0A0MS14 117 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 A0A0D9SG52 128 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 KANTRA0A1W2PQU2 76 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 BCL2L11O43521 198 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 CFIP05156 583 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 FAHP16930 419 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 CCL1P22362 96 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 AGTR1P30556 359 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 SERPINF1P36955 418 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 ENDOGQ14249 297 aaKnown RBP8.83□□□□□ -1
LRRC28-216ENST00000559819 SLC9A3R2Q15599 337 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 KCNMB1Q16558 191 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 PGAP1Q75T13 922 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 OVCH2Q7RTZ1 564 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 OR2W3Q7Z3T1 314 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 HOGA1Q86XE5 327 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 BOLLQ8N9W6 283 aaKnown RBP8.83□□□□□ -1
LRRC28-216ENST00000559819 ZBTB44Q8NCP5 570 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 PXT1Q8NFP0 134 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 KCNG3Q8TAE7 436 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 SLC25A43Q8WUT9 341 aaPredicted RBP8.83□□□□□ -1
LRRC28-216ENST00000559819 FBXW5Q969U6 566 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 ZNF837Q96EG3 531 aaPredicted RBP8.83□□□□□ -1
LRRC28-216ENST00000559819 PROK2Q9HC23 129 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 ZNF160Q9HCG1 818 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 MBD2Q9UBB5 411 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 C5orf51A6NDU8 294 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 PATE3B3GLJ2 98 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 SDCBPO00560 298 aaPredicted RBP8.83□□□□□ -1
LRRC28-216ENST00000559819 CHRM2P08172 466 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 COX6A1P12074 109 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 NAT1P18440 290 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 EIF1P41567 113 aaKnown RBP8.83□□□□□ -1
LRRC28-216ENST00000559819 PRSS12P56730 875 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 ZMYND11Q15326 602 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 ARMC10Q8N2F6 343 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 GTPBP8Q8N3Z3 284 aaPredicted RBP8.83□□□□□ -1
LRRC28-216ENST00000559819 OR51T1Q8NGJ9 327 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 MAFAQ8NHW3 353 aaPredicted RBP8.83□□□□□ -1
LRRC28-216ENST00000559819 SLC39A7Q92504 469 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 TMEM230Q96A57 120 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 ST6GALNAC5Q9BVH7 336 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 RBM24Q9BX46 236 aaKnown RBP8.83□□□□□ -1
LRRC28-216ENST00000559819 C5orf66Q9H5L9 145 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 RASL12Q9NYN1 266 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 PI4KAP42356 2102 aa8.83□□□□□ -1
LRRC28-216ENST00000559819 D6RAR5 112 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 STMND1H3BQB6 276 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 MFNGO00587 321 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 TSPAN4O14817 238 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 SCGNO76038 276 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 HTR3BO95264 441 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 CD63P08962 238 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 FGF5P12034 268 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 SERPINA2P20848 420 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 MSR1P21757 451 aa8.82□□□□□ -1
LRRC28-216ENST00000559819 ADH6P28332 368 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms