RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 LMO4P61968 165 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 GNB2P62879 340 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 IL5RAQ01344 420 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 ROM1Q03395 351 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 EGR3Q06889 387 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 MAB21L1Q13394 359 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 ZNF181Q2M3W8 571 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 ESCO2Q56NI9 601 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 TMEM255AQ5JRV8 349 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 DCAF12L2Q5VW00 463 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 LIPNQ5VXI9 398 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 SLX4IPQ5VYV7 408 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 ZNF322Q6U7Q0 402 aaPredicted RBP3.69□□□□□ -1.82
SNX1-205ENST00000559339 BTNL3Q6UXE8 466 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 LRRN1Q6UXK5 716 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 ZBTB49Q6ZSB9 765 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 ZNF771Q7L3S4 317 aaPredicted RBP3.69□□□□□ -1.82
SNX1-205ENST00000559339 MOGAT3Q86VF5 341 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 LRRC28Q86X40 367 aaPredicted RBP3.69□□□□□ -1.82
SNX1-205ENST00000559339 ZNF679Q8IYX0 411 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 BBS1Q8NFJ9 593 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 OR56B2PQ8NGI1 322 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 OR2T27Q8NH04 317 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 ZNF420Q8TAQ5 688 aaPredicted RBP3.69□□□□□ -1.82
SNX1-205ENST00000559339 SPSB4Q96A44 273 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 EME1Q96AY2 570 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 SGK3Q96BR1 496 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 PKP2Q99959 881 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 SOX7Q9BT81 388 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 C9orf16Q9BUW7 83 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 GABARAPL3Q9BY60 117 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 RIBC2Q9H4K1 309 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 MOB1AQ9H8S9 216 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 UFSP2Q9NUQ7 469 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 HAO2Q9NYQ3 351 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 MIOXQ9UGB7 285 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 OR5V1Q9UGF6 321 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 WARS2Q9UGM6 360 aaKnown RBP3.69□□□□□ -1.82
SNX1-205ENST00000559339 IKZF2Q9UKS7 526 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.69□□□□□ -1.82
SNX1-205ENST00000559339 GTF2A1LQ9UNN4 478 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 PPIAL4AQ9Y536 164 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 LRP12Q9Y561 859 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 SVEP1Q4LDE5 3571 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 TRAV38-1A0A0B4J264 116 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 PPIAL4CA0A0B4J2A2 164 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 A0A0U1RQV5 110 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 ZNF816-ZNF321PA0A0X1KG74 233 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 hCG_38984A0A1B0GV85 526 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 A0A1B0GWJ7 208 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 FAM157AC9JC47 383 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 PSMD9O00233 223 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 EI24O14681 340 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 MLNRO43193 412 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 NDUFA2O43678 99 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 PLPP2O43688 288 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 SULT1C4O75897 302 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 ZNF205O95201 554 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 BAG2O95816 211 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 CYB5R3P00387 301 aaPredicted RBP3.68□□□□□ -1.82
SNX1-205ENST00000559339 CST4P01036 141 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 IGHV2-70P01814 119 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 ALPLP05186 524 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 GRPP07492 148 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 PSKH1P11801 424 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 ATP6V1B1P15313 513 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 RPS2P15880 293 aaKnown RBP3.68□□□□□ -1.82
SNX1-205ENST00000559339 SLC2A5P22732 501 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 EPHA2P29317 976 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 HTR1FP30939 366 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 POLR2IP36954 125 aaKnown RBP3.68□□□□□ -1.82
SNX1-205ENST00000559339 CD200P41217 278 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 MAP2K3P46734 347 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 NPY4RP50391 375 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 ACTC1P68032 377 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 ACTA1P68133 377 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 LCN2P80188 198 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 EFNB1P98172 346 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 FAM3AP98173 230 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 TMED1Q13445 227 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 ZMYND11Q15326 602 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 OR8B8Q15620 311 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 MICBQ29980 383 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 BCL2L15Q5TBC7 163 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 AADACL4Q5VUY2 407 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 MEDAGQ5VYS4 303 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 C12orf73Q69YU5 71 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 KCTD8Q6ZWB6 473 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 PRSS45Q7RTY3 260 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 FAM220AQ7Z4H9 259 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 THAP5Q7Z6K1 395 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 SLC35F2Q8IXU6 374 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 CBR4Q8N4T8 237 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 ZNF555Q8NEP9 628 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 SEMA6DQ8NFY4 1073 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 OR10H4Q8NGA5 316 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 OR8B3Q8NGG8 313 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 OR51G2Q8NGK0 314 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 NANPQ8TBE9 248 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 Q8TCH9 128 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms