RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 MESTQ5EB52 335 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 TMPRSS11AQ6ZMR5 421 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 SLC16A14Q7RTX9 510 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 WDFY1Q8IWB7 410 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 C1orf174Q8IYL3 243 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 OR9Q1Q8NGQ5 310 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 DVL3Q92997 716 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 TMEM54Q969K7 222 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 NMNAT3Q96T66 252 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 MNTQ99583 582 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 SLITRK2Q9H156 845 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 OR51V1Q9H2C8 321 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 SIAEQ9HAT2 523 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 CYSLTR2Q9NS75 346 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 TMEM38BQ9NVV0 291 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 PLEK2Q9NYT0 353 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 VSX1Q9NZR4 365 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 EIF3KQ9UBQ5 218 aaKnown RBP13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 OPN4Q9UHM6 478 aa13.57□□□□□ -0.24
CDC42BPB-203ENST00000558867 C12orf71A8MTZ7 269 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 C11orf98E9PRG8 122 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 RENP00797 406 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 F13BP05160 661 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 OR2T7P0C7T2 308 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 GALP22466 123 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 GADD45AP24522 165 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 ZNF84P51523 738 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 BLVRAP53004 296 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 DOC2BQ14184 412 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 SPCS2Q15005 226 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 ZNF718Q3SXZ3 478 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 NRN1LQ496H8 165 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 ZMAT1Q5H9K5 638 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 LINC01590Q5TEZ4 76 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 LEG1Q6P5S2 330 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 SLC35D2Q76EJ3 337 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 SYS1Q8N2H4 156 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 OR1J1Q8NGS3 322 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 OR2T4Q8NH00 348 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 OR2T27Q8NH04 317 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 OTULINQ96BN8 352 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 MRPL48Q96GC5 212 aaKnown RBP13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 SLC25A44Q96H78 314 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 DIRC2Q96SL1 478 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 CNN2Q99439 309 aaKnown RBP13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 COQ7Q99807 217 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 SH3GL3Q99963 347 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 MRI1Q9BV20 369 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 MARCH7Q9H992 704 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 CGGBP1Q9UFW8 167 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 AUP1Q9Y679 476 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 TRRAPQ9Y4A5 3859 aa13.56□□□□□ -0.24
CDC42BPB-203ENST00000558867 A0A1W2PRG6 482 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 DNAJC9-AS1A6NH13 148 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 A6NIZ1 184 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 DHHO43323 396 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 RNF13O43567 381 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 HSMCR30P0CW71 290 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 CLUP10909 449 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 CCL2P13500 99 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 PSMA1P25786 263 aaKnown RBP13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 DAP3P51398 398 aaKnown RBP13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 TAS2R43P59537 309 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 RAP1BP61224 184 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 RPS7P62081 194 aaKnown RBP13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 RAP1AP62834 184 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 ZNF322Q6U7Q0 402 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 NHLRC1Q6VVB1 395 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 ZBTB46Q86UZ6 589 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 DYNC2LI1Q8TCX1 351 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 A3GALT2U3KPV4 340 aa13.55□□□□□ -0.24
CDC42BPB-203ENST00000558867 DAPL1A0PJW8 107 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 PRSS37A4D1T9 235 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 XKRYO14609 159 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 SPRY3O43610 288 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 APOL3O95236 402 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 RNASE1P07998 156 aaKnown RBP13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 ZNF182P17025 639 aaPredicted RBP13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 CCNOP22674 350 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 CLRN1P58418 232 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 ERVS71-1P61550 626 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 ACTA2P62736 377 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 ACTG2P63267 376 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 GLO1Q04760 184 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 OR2G6Q5TZ20 316 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 CD200R1LQ6Q8B3 271 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 SHFQ7M4L6 423 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 HDDC2Q7Z4H3 204 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 LHFPL3Q86UP9 236 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 PAQR4Q8N4S7 273 aaPredicted RBP13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 SPICQ8N5J4 248 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 FGFBP3Q8TAT2 258 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 HAVCR2Q8TDQ0 301 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 UFD1Q92890 307 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 ALG12Q9BV10 488 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 ALG8Q9BVK2 526 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 MS4A7Q9GZW8 240 aaPredicted RBP13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 PURGQ9UJV8 347 aaKnown RBP13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 ZDHHC8Q9ULC8 765 aa13.54□□□□□ -0.24
CDC42BPB-203ENST00000558867 STUB1Q9UNE7 303 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms