RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 TVP23BQ9NYZ1 205 aa12.8□□□□□ -0.36
RPL28-206ENST00000558752 MRPL15Q9P015 296 aaKnown RBP12.8□□□□□ -0.36
RPL28-206ENST00000558752 LRCH1Q9Y2L9 728 aa12.8□□□□□ -0.36
RPL28-206ENST00000558752 ARHGAP32A7KAX9 2087 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 TRRAPQ9Y4A5 3859 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 ACOD1A6NK06 481 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 TMEM178BH3BS89 294 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 LYNP07948 512 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 H2BFMP0C1H6 154 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 OPRL1P41146 370 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 DEFA6Q01524 100 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 TMEM236Q5W0B7 351 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 THEM6Q8WUY1 208 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 DUX5Q96PT3 197 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 GABARAPL1Q9H0R8 117 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 RGCCQ9H4X1 137 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 H2AFY2Q9P0M6 372 aaPredicted RBP12.79□□□□□ -0.36
RPL28-206ENST00000558752 TMEM14AQ9Y6G1 99 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 TANC2Q9HCD6 1990 aa12.79□□□□□ -0.36
RPL28-206ENST00000558752 TRAPPC2LH3BP13 241 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 MLNRO43193 412 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 IRF2P14316 349 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 CD200P41217 278 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 CX3CR1P49238 355 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 OR8G1Q15617 311 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 SNAI3Q3KNW1 292 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 SPRNQ5BIV9 151 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 LCN1P1Q5VSP4 162 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 ZFP1Q6P2D0 407 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 KCTD18Q6PI47 426 aaPredicted RBP12.78□□□□□ -0.36
RPL28-206ENST00000558752 SLC16A9Q7RTY1 509 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 BHLHE23Q8NDY6 225 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 Q8TCH9 128 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 OR10A2Q9H208 303 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 ZNF391Q9UJN7 358 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 LAMP5Q9UJQ1 280 aa12.78□□□□□ -0.36
RPL28-206ENST00000558752 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.77□□□□□ -0.37
RPL28-206ENST00000558752 ZAR1LA6NP61 321 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 H0YL77 283 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 EBAG9O00559 213 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
RPL28-206ENST00000558752 CRYBA1P05813 215 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 ANXA2P07355 339 aaKnown RBP12.77□□□□□ -0.37
RPL28-206ENST00000558752 PSKH1P11801 424 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 ALOX5APP20292 161 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 SLC2A5P22732 501 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 DCTDP32321 178 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 ACTR3P61158 418 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 RPS7P62081 194 aaKnown RBP12.77□□□□□ -0.37
RPL28-206ENST00000558752 EFNB1P98172 346 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 PAX8Q06710 450 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 APOFQ13790 326 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 SLC9A3R2Q15599 337 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 TIGD6Q17RP2 521 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 GLYATL3Q5SZD4 288 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 C16orf87Q6PH81 154 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 C9orf139Q6ZV77 190 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 AMIGO2Q86SJ2 522 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 FTMTQ8N4E7 242 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 OR10AD1Q8NGE0 317 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 OR11L1Q8NGX0 322 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 ASB17Q8WXJ9 295 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 LRTOMTQ8WZ04 291 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 SGK3Q96BR1 496 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 SIGLEC11Q96RL6 698 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 MNTQ99583 582 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 SSBP3Q9BWW4 388 aaPredicted RBP12.77□□□□□ -0.37
RPL28-206ENST00000558752 MIOXQ9UGB7 285 aa12.77□□□□□ -0.37
RPL28-206ENST00000558752 ANKRD30BLA7E2S9 258 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 F5H0A9 414 aaPredicted RBP12.76□□□□□ -0.37
RPL28-206ENST00000558752 F5H5P2 479 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 ZNF254O75437 659 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 CA6P23280 308 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 MMP16P51512 607 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 ZNF121P58317 390 aaPredicted RBP12.76□□□□□ -0.37
RPL28-206ENST00000558752 BPIFB3P59826 476 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 MAB21L1Q13394 359 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 ZMYND11Q15326 602 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 KCNJ8Q15842 424 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 KLF17Q5JT82 389 aaPredicted RBP12.76□□□□□ -0.37
RPL28-206ENST00000558752 SLX4IPQ5VYV7 408 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 SPATC1Q76KD6 591 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 MEPCEQ7L2J0 689 aaKnown RBP12.76□□□□□ -0.37
RPL28-206ENST00000558752 NLRC3Q7RTR2 1065 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 PRSS45Q7RTY3 260 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 BCL6BQ8N143 479 aaPredicted RBP12.76□□□□□ -0.37
RPL28-206ENST00000558752 CSNK2A3Q8NEV1 391 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 ZDHHC16Q969W1 377 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 PGAM5Q96HS1 289 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 RBM4BQ9BQ04 359 aaKnown RBP12.76□□□□□ -0.37
RPL28-206ENST00000558752 FN3KRPQ9HA64 309 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 TRIM36Q9NQ86 728 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 C14orf119Q9NWQ9 140 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 HAO2Q9NYQ3 351 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 N6AMT1Q9Y5N5 214 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 MMP24Q9Y5R2 645 aa12.76□□□□□ -0.37
RPL28-206ENST00000558752 SLC22A31A6NKX4 558 aa12.75□□□□□ -0.37
RPL28-206ENST00000558752 TBX1O43435 398 aa12.75□□□□□ -0.37
RPL28-206ENST00000558752 SELENOFO60613 162 aa12.75□□□□□ -0.37
RPL28-206ENST00000558752 HLA-DPB1P04440 258 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms