RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 MICAQ29983 383 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 TUSC1Q2TAM9 212 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 PRR31Q5SQ13 230 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 OR2T5Q6IEZ7 315 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 ZNF770Q6IQ21 691 aaPredicted RBP12.89□□□□□ -0.35
TPM1-211ENST00000558314 BTN2A1Q7KYR7 527 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 SLC16A9Q7RTY1 509 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 DPY19L4Q7Z388 723 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 FAM90A1Q86YD7 464 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 FGFRL1Q8N441 504 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 KIR3DL3Q8N743 410 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 PNLDC1Q8NA58 520 aaKnown RBP12.89□□□□□ -0.35
TPM1-211ENST00000558314 OR2T29Q8NH02 315 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 TEX47Q8TBZ9 253 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 GATAD2BQ8WXI9 593 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 PGAM5Q96HS1 289 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 WDFY2Q96P53 400 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 TBX15Q96SF7 602 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 OR51V1Q9H2C8 321 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 TRIM36Q9NQ86 728 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 ONECUT1Q9UBC0 465 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 DNAJB11Q9UBS4 358 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 BAIAP2Q9UQB8 552 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 TCRBV5S2A0A599 114 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 SRRM5B3KS81 715 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 DVL1O14640 695 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 KCNAB3O43448 404 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 KNG1P01042 644 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 OTX1P32242 354 aaPredicted RBP12.88□□□□□ -0.35
TPM1-211ENST00000558314 SLC25A1P53007 311 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 CSNK2BP67870 215 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 SRSF4Q08170 494 aaKnown RBP12.88□□□□□ -0.35
TPM1-211ENST00000558314 FAM98BQ52LJ0 330 aaKnown RBP12.88□□□□□ -0.35
TPM1-211ENST00000558314 C17orf107Q6ZR85 190 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 GCSAMQ8N6F7 178 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 OR10G2Q8NGC3 310 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 CCDC124Q96CT7 223 aaKnown RBP12.88□□□□□ -0.35
TPM1-211ENST00000558314 SEH1LQ96EE3 360 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 LRGUKQ96M69 825 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 INTS14Q96SY0 518 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 CCL13Q99616 98 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 NIPSNAP1Q9BPW8 284 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 PAPOLGQ9BWT3 736 aaKnown RBP12.88□□□□□ -0.35
TPM1-211ENST00000558314 CHIAQ9BZP6 476 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 OPA3Q9H6K4 179 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 ZNF696Q9H7X3 374 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 TAS2R1Q9NYW7 299 aa12.88□□□□□ -0.35
TPM1-211ENST00000558314 CENPVL3A0A0U1RRI6 287 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 A0A1B0GW55 424 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 POM121CA8CG34 1229 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 NDUFA2O43678 99 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 H2BFMP0C1H6 154 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 DUX4L2P0CJ85 424 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 DUX4L3P0CJ86 424 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 DUX4L4P0CJ87 422 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 DUX4L5P0CJ88 424 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 DUX4L6P0CJ89 424 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 DUX4L7P0CJ90 424 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 GSTT1P30711 240 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 GRK5P34947 590 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 MAGEA2P43356 314 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 RAG2P55895 527 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 ZNF121P58317 390 aaPredicted RBP12.87□□□□□ -0.35
TPM1-211ENST00000558314 FAM3AP98173 230 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 PRB3Q04118 309 aaPredicted RBP12.87□□□□□ -0.35
TPM1-211ENST00000558314 IKZF1Q13422 519 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 PCK2Q16822 640 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 MICBQ29980 383 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 SPATS1Q496A3 300 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 DUX4L9Q6RFH8 374 aaPredicted RBP12.87□□□□□ -0.35
TPM1-211ENST00000558314 TREML4Q6UXN2 200 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 KCTD8Q6ZWB6 473 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 PIGWQ7Z7B1 504 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.87□□□□□ -0.35
TPM1-211ENST00000558314 PLPP7Q8NBV4 271 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 SGK3Q96BR1 496 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 NSL1Q96IY1 281 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 ABHD6Q9BV23 337 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 NMNAT2Q9BZQ4 307 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 OR10A2Q9H208 303 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 SP140LQ9H930 580 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 DUX4Q9UBX2 424 aa12.87□□□□□ -0.35
TPM1-211ENST00000558314 A0A1W2PRD5 423 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 A0A1W2PRF3 423 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 A0A1W2PRM7 423 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 GNGT2O14610 69 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 LIPFP07098 398 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 MELTFP08582 738 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 DDOSTP39656 456 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 BLVRAP53004 296 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 MS4A2Q01362 244 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 KLHL12Q53G59 568 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 TEX30Q5JUR7 227 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 Q6YL49 198 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 WDR86Q86TI4 376 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 FAM216BQ8N7L0 139 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 OR1M1Q8NGA1 313 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 OR5T2Q8NGG2 359 aa12.86□□□□□ -0.35
TPM1-211ENST00000558314 GIPC3Q8TF64 312 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms