RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 H3BN98 237 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 P2RY10O00398 339 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 HOXA3O43365 443 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-235ENST00000557740 TOX4O94842 621 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 APOC1P02654 83 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 GYPAP02724 150 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 PAICSP22234 425 aaKnown RBP12.15□□□□□ -0.46
SHMT2-235ENST00000557740 CFL1P23528 166 aaKnown RBP12.15□□□□□ -0.46
SHMT2-235ENST00000557740 TRIM25Q14258 630 aaKnown RBP12.15□□□□□ -0.46
SHMT2-235ENST00000557740 GK3PQ14409 553 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 GFOD2Q3B7J2 385 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 METTL11BQ5VVY1 283 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 SLC16A9Q7RTY1 509 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 DPY19L4Q7Z388 723 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 FAM90A1Q86YD7 464 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 CCDC124Q96CT7 223 aaKnown RBP12.15□□□□□ -0.46
SHMT2-235ENST00000557740 REEP6Q96HR9 211 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 NSL1Q96IY1 281 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 LRGUKQ96M69 825 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 ZNF696Q9H7X3 374 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 MED20Q9H944 212 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 DNAJC27Q9NZQ0 273 aa12.15□□□□□ -0.46
SHMT2-235ENST00000557740 FAM183AA6NL82 134 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 POM121CA8CG34 1229 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 SFTPBP07988 381 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 GSTT1P30711 240 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 GNALP38405 381 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 LINC01590Q5TEZ4 76 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 RUSC1-AS1Q66K80 236 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 CD300LDQ6UXZ3 194 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 FAM57BQ71RH2 274 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 SHFQ7M4L6 423 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 GCSAMQ8N6F7 178 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 IQCF1Q8N6M8 205 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 OR52H1Q8NGJ2 320 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 LRRC29Q8WV35 223 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 RNF133Q8WVZ7 376 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 GATAD2BQ8WXI9 593 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 TMIGD2Q96BF3 282 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 WDFY2Q96P53 400 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 ABHD6Q9BV23 337 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 PAPOLGQ9BWT3 736 aaKnown RBP12.14□□□□□ -0.47
SHMT2-235ENST00000557740 OR10A2Q9H208 303 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 SMURF1Q9HCE7 757 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 NOX4Q9NPH5 578 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 TNFRSF19Q9NS68 423 aa12.14□□□□□ -0.47
SHMT2-235ENST00000557740 IGHV3OR15-7A0A075B7D8 119 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 hCG_38984A0A1B0GV85 526 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 SRRM5B3KS81 715 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 DVL1O14640 695 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 TIPRLO75663 272 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 CST1P01037 141 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 CRYBA1P05813 215 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 RAP2AP10114 183 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 MDKP21741 143 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-235ENST00000557740 CALB2P22676 271 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 ZNF121P58317 390 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-235ENST00000557740 FAM3AP98173 230 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 MS4A2Q01362 244 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 SNCBQ16143 134 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 MICBQ29980 383 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 TEX36Q5VZQ5 186 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 FTMTQ8N4E7 242 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 GIPC3Q8TF64 312 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 ST8SIA4Q92187 359 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 TAF15Q92804 592 aaKnown RBP eCLIP12.13□□□□□ -0.47
SHMT2-235ENST00000557740 ASB9Q96DX5 294 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 PGAM5Q96HS1 289 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 TBX15Q96SF7 602 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 NIPSNAP1Q9BPW8 284 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 RASSF4Q9H2L5 321 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 PRDM13Q9H4Q3 707 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 RNPEPL1Q9HAU8 725 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 BRD7Q9NPI1 651 aa12.13□□□□□ -0.47
SHMT2-235ENST00000557740 PRPF19Q9UMS4 504 aaKnown RBP12.13□□□□□ -0.47
SHMT2-235ENST00000557740 DOCK11Q5JSL3 2073 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 ARRDC5A6NEK1 342 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 ANXA2P2A6NMY6 339 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 TNFRSF13BO14836 293 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-235ENST00000557740 GLCEO94923 617 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 ECDO95905 644 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-235ENST00000557740 LHBP01229 141 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 H2BFMP0C1H6 154 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 MMP9P14780 707 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 MUC1P15941 1255 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-235ENST00000557740 OMGP23515 440 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 POU1F1P28069 291 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 OPRL1P41146 370 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 GSK3AP49840 483 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 CSNK2BP67870 215 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 POU4F2Q12837 409 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 PDCD1Q15116 288 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 C11orf91Q3C1V1 193 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 BTN2A1Q7KYR7 527 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 WDR86Q86TI4 376 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-235ENST00000557740 CSNK2A3Q8NEV1 391 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 OR1M1Q8NGA1 313 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 SGK3Q96BR1 496 aa12.12□□□□□ -0.47
SHMT2-235ENST00000557740 FAM71F1Q96KD3 344 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms