RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 MED27Q6P2C8 311 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 XKRXQ6PP77 449 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 DRAM2Q6UX65 266 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 NCCRP1Q6ZVX7 275 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 SSX7Q7RTT5 188 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 CBR4Q8N4T8 237 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 METTL13Q8N6R0 699 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 CCDC71LQ8N9Z2 235 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 CHST4Q8NCG5 386 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 OR8G5Q8NG78 346 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 OR5D18Q8NGL1 313 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 BLOC1S5Q8TDH9 187 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 GEMIN6Q8WXD5 167 aaKnown RBP2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 CDS1Q92903 461 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 FAM19A4Q96LR4 140 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 OR5M11Q96RB7 305 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 GPR21Q99679 349 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 ARHGDIGQ99819 225 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 C9orf16Q9BUW7 83 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 DERL2Q9GZP9 239 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 EDA2RQ9HAV5 297 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 C6orf50Q9HD87 102 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 DPM3Q9P2X0 92 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 APOBEC3BQ9UH17 382 aaKnown RBP2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 VAX2Q9UIW0 290 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 KLK13Q9UKR3 277 aa2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 POLR3HQ9Y535 204 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P14-201ENST00000557424 IGLV8-61A0A075B6I0 122 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 SMIM26A0A096LP01 95 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 A0A1B0GTI1 187 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 OR6C70A6NIJ9 312 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 SYCE1LA8MT33 242 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 SRRM5B3KS81 715 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 C9J4A7 227 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 LINC01619G3V211 115 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 H0Y980 276 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 XKRYO14609 159 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 KMOO15229 486 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 TBL1XO60907 577 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 KLF8O95600 359 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 RAB36O95755 333 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 MOSP00540 346 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 SEMG1P04279 462 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 RETP07949 1114 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 KRT7P08729 469 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 CTXN2P0C2S0 81 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 ZNF35P13682 527 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 WARSP23381 471 aaKnown RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 PAX6P26367 422 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 PFN2P35080 140 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 SLC25A1P53007 311 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 OR12D2P58182 307 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 TAS2R19P59542 299 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 B2MP61769 119 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 SLC35A1P78382 337 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 PRR3P79522 188 aaKnown RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 CD164Q04900 197 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 SMARCB1Q12824 385 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 MLLT11Q13015 90 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 STX5Q13190 355 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 UAP1Q16222 522 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 GUCA2BQ16661 112 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 ZNF630Q2M218 657 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 PIGGQ5H8A4 983 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 HBMQ6B0K9 141 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 PLET1Q6UQ28 207 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 OAFQ86UD1 273 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 WDFY1Q8IWB7 410 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 HS3ST5Q8IZT8 346 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 STPG2Q8N412 459 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 OR6Q1Q8NGQ2 317 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 OR5AK3PQ8NH89 298 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 ACTL9Q8TC94 416 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 DOK4Q8TEW6 326 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 CPNE4Q96A23 557 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 DGCR14Q96DF8 476 aaKnown RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 ZMYND19Q96E35 227 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 PLEKHF1Q96S99 279 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 ATOH8Q96SQ7 321 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 EBF4Q9BQW3 602 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 CDCA4Q9BXL8 241 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 POLR2J2Q9GZM3 115 aaKnown RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 POLR2J3Q9H1A7 115 aaKnown RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 ABCB9Q9NP78 766 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 ZDHHC4Q9NPG8 344 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 RGS18Q9NS28 235 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 RBFOX1Q9NWB1 397 aaKnown RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 TAS2R9Q9NYW1 312 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 PRELID1Q9Y255 219 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 KCNE3Q9Y6H6 103 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 MAP3K15Q6ZN16 1313 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 USP42Q9H9J4 1324 aaKnown RBP2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 MAPK8IP3Q9UPT6 1336 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 ZFYVE9O95405 1425 aa2.33□□□□□ -2.04
HMGB1P14-201ENST00000557424 A0A0B4J2A0 478 aa2.32□□□□□ -2.04
HMGB1P14-201ENST00000557424 IGKV1-8A0A0C4DH67 115 aa2.32□□□□□ -2.04
HMGB1P14-201ENST00000557424 FTCDNL1E5RQL4 147 aa2.32□□□□□ -2.04
HMGB1P14-201ENST00000557424 J3QT63 122 aa2.32□□□□□ -2.04
HMGB1P14-201ENST00000557424 M0QZ92 97 aa2.32□□□□□ -2.04
HMGB1P14-201ENST00000557424 CDC40O60508 579 aaKnown RBP eCLIP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms