RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 H0YL77 283 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 M0R233 179 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 MRPS14O60783 128 aaKnown RBP10.92□□□□□ -0.66
SHMT2-227ENST00000557269 HLA-DPB1P04440 258 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 ISG15P05161 165 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 SELENOVP59797 346 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 SLC3A1Q07837 685 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 ACSM1Q08AH1 577 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 MRPL28Q13084 256 aaKnown RBP10.92□□□□□ -0.66
SHMT2-227ENST00000557269 HNRNPA0Q13151 305 aaKnown RBP10.92□□□□□ -0.66
SHMT2-227ENST00000557269 TBCEQ15813 527 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-227ENST00000557269 Q6ZSR3 168 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 DVL3Q92997 716 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-227ENST00000557269 PGLYRP3Q96LB9 341 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 SLC30A2Q9BRI3 323 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 OPA3Q9H6K4 179 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 ZNF696Q9H7X3 374 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 DYNLRB1Q9NP97 96 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 RHBDD3Q9Y3P4 386 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 V9GYS6 101 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 ABCA12Q86UK0 2595 aa10.92□□□□□ -0.66
SHMT2-227ENST00000557269 TACC2O95359 2948 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 AKAP6Q13023 2319 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 A0A1B0GVI7 797 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 A0A1B0GWJ7 208 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 TMEM212A6NML5 194 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 C17orf100A8MU93 164 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 MLNRO43193 412 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 SYT7O43581 403 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 SPRY3O43610 288 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 DHRS3O75911 302 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 LY6HO94772 140 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 TNFAIP8O95379 198 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 IGHV1-46P01743 117 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 UBCP0CG48 685 aaKnown RBP10.91□□□□□ -0.66
SHMT2-227ENST00000557269 HSMCR30P0CW71 290 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 SELEP16581 610 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 FAHP16930 419 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 CELP19835 753 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 CA6P23280 308 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 CFL1P23528 166 aaKnown RBP10.91□□□□□ -0.66
SHMT2-227ENST00000557269 RBMXP38159 391 aaKnown RBP10.91□□□□□ -0.66
SHMT2-227ENST00000557269 PPOXP50336 477 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 ZNF81P51508 661 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 DMRTC1Q5HYR2 192 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 DOK3Q7L591 496 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 ZNF676Q8N7Q3 588 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 OR10AD1Q8NGE0 317 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 OR13C5Q8NGS8 318 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 OR5AK2Q8NH90 309 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 GHSRQ92847 366 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 SMIM19Q96E16 107 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 OPALINQ96PE5 141 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 SORCS2Q96PQ0 1159 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 VRK1Q99986 396 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-227ENST00000557269 GPR160Q9UJ42 338 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 ZNF391Q9UJN7 358 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 PIGLQ9Y2B2 252 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 ARFGEF3Q5TH69 2177 aa10.91□□□□□ -0.66
SHMT2-227ENST00000557269 LOC390937A0A1W2PQ73 354 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 PLSCR5A0PG75 271 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 H7C417 338 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 PLPP2O43688 288 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 INMTO95050 263 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 ACHEP22303 614 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 MAP2K3P46734 347 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 RPS11P62280 158 aaKnown RBP eCLIP10.9□□□□□ -0.66
SHMT2-227ENST00000557269 BDH1Q02338 343 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 MOGQ16653 247 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 TSTQ16762 297 aaKnown RBP10.9□□□□□ -0.66
SHMT2-227ENST00000557269 TMEM244Q5VVB8 128 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 SEMA6DQ8NFY4 1073 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 TSPAN14Q8NG11 270 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 OR2Z1Q8NG97 314 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 HAVCR2Q8TDQ0 301 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 PIGTQ969N2 578 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 NR1H4Q96RI1 486 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-227ENST00000557269 MGLLQ99685 303 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 FGF23Q9GZV9 251 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-227ENST00000557269 TMEM100Q9NV29 134 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 ZNF701Q9NV72 531 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-227ENST00000557269 MRPL15Q9P015 296 aaKnown RBP10.9□□□□□ -0.66
SHMT2-227ENST00000557269 PMF1-BGLAPU3KQ54 211 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 POLQO75417 2590 aa10.9□□□□□ -0.66
SHMT2-227ENST00000557269 PDZD2O15018 2839 aa10.9□□□□□ -0.67
SHMT2-227ENST00000557269 IGHV3-64DA0A0J9YX35 117 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 ZNF850A8MQ14 1090 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 F5H5P2 479 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 NCR1O76036 304 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 CST4P01036 141 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 SMIM18P0DKX4 95 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 DNASE1P24855 282 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 LIPAP38571 399 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 DDOSTP39656 456 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 TAS2R43P59537 309 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 CCL8P80075 99 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 RIPPLY1Q0D2K3 151 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 MLLT11Q13015 90 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-227ENST00000557269 INSL4Q14641 139 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 UBE2UQ5VVX9 321 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms