RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 DHRS7BQ6IAN0 325 aaPredicted RBP12.17□□□□□ -0.46
CHD8-211ENST00000556833 ZNF511Q8NB15 262 aa12.17□□□□□ -0.46
CHD8-211ENST00000556833 H1FXQ92522 213 aaKnown RBP12.17□□□□□ -0.46
CHD8-211ENST00000556833 SLAMF6Q96DU3 332 aa12.17□□□□□ -0.46
CHD8-211ENST00000556833 SLC22A4Q9H015 551 aa12.17□□□□□ -0.46
CHD8-211ENST00000556833 BRD7Q9NPI1 651 aa12.17□□□□□ -0.46
CHD8-211ENST00000556833 SNTG1Q9NSN8 517 aa12.17□□□□□ -0.46
CHD8-211ENST00000556833 DNAJC27Q9NZQ0 273 aa12.17□□□□□ -0.46
CHD8-211ENST00000556833 MRPL15Q9P015 296 aaKnown RBP12.17□□□□□ -0.46
CHD8-211ENST00000556833 RPUSD1Q9UJJ7 312 aaKnown RBP12.17□□□□□ -0.46
CHD8-211ENST00000556833 NOP16Q9Y3C1 178 aaKnown RBP12.17□□□□□ -0.46
CHD8-211ENST00000556833 COMMD3-BMI1R4GMX3 469 aa12.17□□□□□ -0.46
CHD8-211ENST00000556833 SLC22A31A6NKX4 558 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 ANKRD30BLA7E2S9 258 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 ACOT8O14734 319 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 CCDC22O60826 627 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 PRB2P02812 416 aaPredicted RBP12.16□□□□□ -0.46
CHD8-211ENST00000556833 SEMG1P04279 462 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 ANXA2P07355 339 aaKnown RBP12.16□□□□□ -0.46
CHD8-211ENST00000556833 CLUP10909 449 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 GSSP48637 474 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 EGR3Q06889 387 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 PGBD2Q6P3X8 592 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 DRAM2Q6UX65 266 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 HACD2Q6Y1H2 254 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 DPY19L4Q7Z388 723 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 LDLRAD3Q86YD5 345 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 ZDHHC21Q8IVQ6 265 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 OR52L1Q8NGH7 329 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 OR8D4Q8NGM9 314 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 GNPDA2Q8TDQ7 276 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 PYURFQ96I23 114 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 CNTD2Q9H8S5 307 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 SPAG4Q9NPE6 437 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 TRIM36Q9NQ86 728 aa12.16□□□□□ -0.46
CHD8-211ENST00000556833 ZNF816-ZNF321PA0A0X1KG74 233 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 CLPXO76031 633 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 PTBP3O95758 552 aaKnown RBP12.15□□□□□ -0.46
CHD8-211ENST00000556833 FABP3P05413 133 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 CX3CR1P49238 355 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 SMIM11AP58511 58 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 PPP1R8Q12972 351 aaKnown RBP12.15□□□□□ -0.46
CHD8-211ENST00000556833 TSPAN31Q12999 210 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 TIGD6Q17RP2 521 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 CDONQ4KMG0 1287 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 SLC16A9Q7RTY1 509 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 C11orf53Q8IXP5 236 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 C11orf44Q8N8P7 122 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 SLC37A3Q8NCC5 494 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 OR6K6Q8NGW6 343 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 MCUR1Q96AQ8 359 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 DPAGT1Q9H3H5 408 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 TBC1D23Q9NUY8 699 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 C14orf119Q9NWQ9 140 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 KCNG2Q9UJ96 466 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 SIGLEC9Q9Y336 463 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 CDH10Q9Y6N8 788 aa12.15□□□□□ -0.46
CHD8-211ENST00000556833 BTBD17A6NE02 478 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 RNASEK-C17orf49H0YIS7 233 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.14□□□□□ -0.47
CHD8-211ENST00000556833 ZNF593O00488 134 aaPredicted RBP12.14□□□□□ -0.47
CHD8-211ENST00000556833 NDUFAB1O14561 156 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 NDUFA2O43678 99 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 SOX14O95416 240 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 LHBP01229 141 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 PAX6P26367 422 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 OTX1P32242 354 aaPredicted RBP12.14□□□□□ -0.47
CHD8-211ENST00000556833 IFNGR2P38484 337 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 ENTPD1P49961 510 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 CRMP1Q14194 572 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 OCLNQ16625 522 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 MICBQ29980 383 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 TEX36Q5VZQ5 186 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 WDR82Q6UXN9 313 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 GDPGP1Q6ZNW5 385 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 FAM57BQ71RH2 274 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 LINC00471Q8N535 108 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 ZSCAN4Q8NAM6 433 aaPredicted RBP12.14□□□□□ -0.47
CHD8-211ENST00000556833 OR1M1Q8NGA1 313 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 OR2T4Q8NH00 348 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 REEP6Q96HR9 211 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 KCNJ15Q99712 375 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 BTBD10Q9BSF8 475 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 PAPOLGQ9BWT3 736 aaKnown RBP12.14□□□□□ -0.47
CHD8-211ENST00000556833 FAM107BQ9H098 131 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 WDR13Q9H1Z4 485 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 PPA2Q9H2U2 334 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 ELL3Q9HB65 397 aaPredicted RBP12.14□□□□□ -0.47
CHD8-211ENST00000556833 ZNRD1Q9P1U0 126 aa12.14□□□□□ -0.47
CHD8-211ENST00000556833 A0A1B0GVI7 797 aa12.13□□□□□ -0.47
CHD8-211ENST00000556833 DHRS12A0PJE2 317 aa12.13□□□□□ -0.47
CHD8-211ENST00000556833 MEIOCA2RUB1 952 aa12.13□□□□□ -0.47
CHD8-211ENST00000556833 ANKRD61A6NGH8 418 aa12.13□□□□□ -0.47
CHD8-211ENST00000556833 ZNF878C9JN71 531 aa12.13□□□□□ -0.47
CHD8-211ENST00000556833 CDIPTO14735 213 aa12.13□□□□□ -0.47
CHD8-211ENST00000556833 NPFFO15130 113 aa12.13□□□□□ -0.47
CHD8-211ENST00000556833 ARPC2O15144 300 aa12.13□□□□□ -0.47
CHD8-211ENST00000556833 XRCC2O43543 280 aa12.13□□□□□ -0.47
CHD8-211ENST00000556833 IDH3BO43837 385 aa12.13□□□□□ -0.47
CHD8-211ENST00000556833 ECDO95905 644 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms