RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 RNF166Q96A37 237 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-225ENST00000556798 FAM71F1Q96KD3 344 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-225ENST00000556798 OR2V2Q96R30 315 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 DIRC2Q96SL1 478 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 ANKRD60Q9BZ19 345 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 ISG20L2Q9H9L3 353 aaKnown RBP14.84□□□□□ -0.03
SHMT2-225ENST00000556798 MYOZ1Q9NP98 299 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-225ENST00000556798 INPP5EQ9NRR6 644 aa14.84□□□□□ -0.03
SHMT2-225ENST00000556798 YLPM1P49750 1951 aaKnown RBP14.84□□□□□ -0.03
SHMT2-225ENST00000556798 A0A0U1RQV5 110 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 RNF223E7ERA6 249 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 F5H5P2 479 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 H3BSH0 61 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 H7C1Q1 480 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 P2RY10O00398 339 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 LIMS3P0CW19 117 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 LIMS4P0CW20 117 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 MYF6P23409 242 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 TNFSF4P23510 183 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 ACKR3P25106 362 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 DSCR9P59020 149 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 MVKQ03426 396 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 OR8B8Q15620 311 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 WDR38Q5JTN6 314 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 AHSA2Q719I0 299 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 ELMOD2Q8IZ81 293 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 PRSS35Q8N3Z0 413 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 RDH5Q92781 318 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 PIMREGQ9BSJ6 248 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 ADAT1Q9BUB4 502 aaKnown RBP14.83□□□□□ -0.04
SHMT2-225ENST00000556798 EGLN1Q9GZT9 426 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 PPP1R3EQ9H7J1 279 aa14.83□□□□□ -0.04
SHMT2-225ENST00000556798 MRPL15Q9P015 296 aaKnown RBP14.83□□□□□ -0.04
SHMT2-225ENST00000556798 IGHV1-69-2A0A0G2JMI3 117 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 LOC390937A0A1W2PQ73 354 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 IRGMA1A4Y4 181 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 RP2O75695 350 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 IGLV3-1P01715 115 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 TACSTD2P09758 323 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 KIR3DL2P43630 455 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 ETV1P50549 477 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 OR8G1Q15617 311 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 MAPK1IP1LQ8NDC0 245 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 PELI1Q96FA3 418 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 MRPL48Q96GC5 212 aaKnown RBP14.82□□□□□ -0.04
SHMT2-225ENST00000556798 TMEM80Q96HE8 168 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 CNBD2Q96M20 576 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 JAM3Q9BX67 310 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 ZNF275Q9NSD4 429 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-225ENST00000556798 PSORS1C1Q9UIG5 152 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 ZNF391Q9UJN7 358 aa14.82□□□□□ -0.04
SHMT2-225ENST00000556798 DIMT1Q9UNQ2 313 aaKnown RBP14.82□□□□□ -0.04
SHMT2-225ENST00000556798 A0A1B0GWJ7 208 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 ANKRD30BLA7E2S9 258 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 SLC1A7O00341 560 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 SMAD7O15105 426 aaKnown RBP14.81□□□□□ -0.04
SHMT2-225ENST00000556798 PIPP12273 146 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-225ENST00000556798 ACHEP22303 614 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 DCKP27707 260 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 DDOSTP39656 456 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 CRYBB2P43320 205 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 NANOS3P60323 173 aaKnown RBP14.81□□□□□ -0.04
SHMT2-225ENST00000556798 ST3GAL4Q11206 333 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 C6orf141Q5SZD1 244 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 SYS1Q8N2H4 156 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 OR2G2Q8NGZ5 317 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 MEGF10Q96KG7 1140 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 PAPOLGQ9BWT3 736 aaKnown RBP14.81□□□□□ -0.04
SHMT2-225ENST00000556798 BPESC1Q9GZL8 116 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 CHODLQ9H9P2 273 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 PLCXD1Q9NUJ7 323 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 DCAF16Q9NXF7 216 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 IL19Q9UHD0 177 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 CLEC2DQ9UHP7 191 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 RAB26Q9ULW5 256 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 RHBDD3Q9Y3P4 386 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 PCDHGB5Q9Y5G0 923 aa14.81□□□□□ -0.04
SHMT2-225ENST00000556798 A0A1B0GTI1 187 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 EFCAB10A6NFE3 127 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 VWC2LB2RUY7 222 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 NDUFS8O00217 210 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 HTR1AP08908 422 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 MYL12AP19105 171 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 MRPS11P82912 194 aaKnown RBP14.8□□□□□ -0.04
SHMT2-225ENST00000556798 SNCBQ16143 134 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 OR2G6Q5TZ20 316 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 PRAMEF6Q5VXH4 476 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 KCTD20Q7Z5Y7 419 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 CSNK2A3Q8NEV1 391 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 CCL17Q92583 94 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 ZNF184Q99676 751 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-225ENST00000556798 TMUB1Q9BVT8 246 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 REG4Q9BYZ8 158 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 SLC22A4Q9H015 551 aa14.8□□□□□ -0.04
SHMT2-225ENST00000556798 CNOT2Q9NZN8 540 aaKnown RBP14.8□□□□□ -0.04
SHMT2-225ENST00000556798 EXOSC1Q9Y3B2 195 aaKnown RBP14.8□□□□□ -0.04
SHMT2-225ENST00000556798 E9PI62 339 aa14.79□□□□□ -0.04
SHMT2-225ENST00000556798 DHRS3O75911 302 aa14.79□□□□□ -0.04
SHMT2-225ENST00000556798 CD99P14209 185 aa14.79□□□□□ -0.04
SHMT2-225ENST00000556798 SLC25A16P16260 332 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms