RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 GNB2P62879 340 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 LIPEQ05469 1076 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 HLXQ14774 488 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-220ENST00000556486 ZNF362Q5T0B9 420 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-220ENST00000556486 OR2T2Q6IF00 324 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 HACD2Q6Y1H2 254 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 DCDC5Q6ZRR9 648 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 PTCHD4Q6ZW05 846 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 RRM2BQ7LG56 351 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 CYP4Z1Q86W10 505 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 C1orf87Q8N0U7 546 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 OR10AD1Q8NGE0 317 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 LINC01006Q8NI28 216 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 RCN3Q96D15 328 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 TMEM246Q9BRR3 403 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 FUZQ9BT04 418 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 FGFR1OP2Q9NVK5 253 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 NDUFAF4Q9P032 175 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 KIF17Q9P2E2 1029 aa8.3□□□□□ -1.08
SCFD1-220ENST00000556486 TET2Q6N021 2002 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-220ENST00000556486 IGHV3-64DA0A0J9YX35 117 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 DCTN6O00399 190 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 IMPA2O14732 288 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 ARPC3O15145 178 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 NDUFA7O95182 113 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 ZNF682O95780 498 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 SERPINA1P01009 418 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 H1F0P07305 194 aaKnown RBP8.29□□□□□ -1.08
SCFD1-220ENST00000556486 MELTFP08582 738 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 PMELP40967 661 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 CD200P41217 278 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 CDKN2AP42771 156 aaKnown RBP8.29□□□□□ -1.08
SCFD1-220ENST00000556486 RAD23AP54725 363 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 RPL15P61313 204 aaKnown RBP8.29□□□□□ -1.08
SCFD1-220ENST00000556486 ECH1Q13011 328 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 DNM1P34Q6PK57 102 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 ZNF841Q6ZN19 808 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 TMEM86BQ8N661 226 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 FITM2Q8N6M3 262 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 SLC26A10Q8NG04 563 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 ZNF420Q8TAQ5 688 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-220ENST00000556486 RSRC1Q96IZ7 334 aaKnown RBP8.29□□□□□ -1.08
SCFD1-220ENST00000556486 C7orf34Q96L11 122 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 CCDC134Q9H6E4 229 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 PTTG3PQ9NZH4 202 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 ABCD2Q9UBJ2 740 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 RPS6KA6Q9UK32 745 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 PLXNB1O43157 2135 aa8.29□□□□□ -1.08
SCFD1-220ENST00000556486 A0A087WWL8 130 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 A6NLC8 198 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 F5H5P2 479 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 SOCS2O14508 198 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 GPR137BO60478 399 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 CYB5R3P00387 301 aaPredicted RBP8.28□□□□□ -1.08
SCFD1-220ENST00000556486 IGHV4-59P01825 116 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 LIPFP07098 398 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 CSF1P09603 554 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 ACSM4P0C7M7 580 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 PITPNBP48739 271 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 GSK3BP49841 420 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 NPY4RP50391 375 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 RPS6KA3P51812 740 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 SLC7A2P52569 658 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 MAB21L1Q13394 359 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 GK2Q14410 553 aaPredicted RBP8.28□□□□□ -1.08
SCFD1-220ENST00000556486 CLEC12AQ5QGZ9 265 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 WDR25Q64LD2 544 aaPredicted RBP8.28□□□□□ -1.08
SCFD1-220ENST00000556486 SLC18B1Q6NT16 456 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 C11orf87Q6NUJ2 197 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 C1orf94Q6P1W5 598 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 SMARCD3Q6STE5 483 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 Q6YL49 198 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 OR5AS1Q8N127 324 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 OR6V1Q8N148 313 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 OR8B3Q8NGG8 313 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 OR8B2Q96RD0 313 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 HCAR1Q9BXC0 346 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 SLC22A4Q9H015 551 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 NOX4Q9NPH5 578 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 KRCC1Q9NPI7 259 aaPredicted RBP8.28□□□□□ -1.08
SCFD1-220ENST00000556486 PNRC2Q9NPJ4 139 aaKnown RBP8.28□□□□□ -1.08
SCFD1-220ENST00000556486 TMEM100Q9NV29 134 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 CLN8Q9UBY8 286 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 CYB5R1Q9UHQ9 305 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 NOP16Q9Y3C1 178 aaKnown RBP8.28□□□□□ -1.08
SCFD1-220ENST00000556486 IER3IP1Q9Y5U9 82 aa8.28□□□□□ -1.08
SCFD1-220ENST00000556486 TRBV4-1A0A0J9YWV2 114 aa8.27□□□□□ -1.09
SCFD1-220ENST00000556486 TNFRSF13BO14836 293 aaPredicted RBP8.27□□□□□ -1.09
SCFD1-220ENST00000556486 ENSAO43768 121 aaKnown RBP8.27□□□□□ -1.09
SCFD1-220ENST00000556486 IDH3BO43837 385 aa8.27□□□□□ -1.09
SCFD1-220ENST00000556486 SFTPBP07988 381 aa8.27□□□□□ -1.09
SCFD1-220ENST00000556486 RAP2AP10114 183 aa8.27□□□□□ -1.09
SCFD1-220ENST00000556486 COX4I1P13073 169 aa8.27□□□□□ -1.09
SCFD1-220ENST00000556486 BTF3P20290 206 aaKnown RBP8.27□□□□□ -1.09
SCFD1-220ENST00000556486 FPR3P25089 353 aa8.27□□□□□ -1.09
SCFD1-220ENST00000556486 OTX1P32242 354 aaPredicted RBP8.27□□□□□ -1.09
SCFD1-220ENST00000556486 GGT2P36268 569 aa8.27□□□□□ -1.09
SCFD1-220ENST00000556486 MDH1P40925 334 aaKnown RBP8.27□□□□□ -1.09
SCFD1-220ENST00000556486 PROK1P58294 105 aa8.27□□□□□ -1.09
SCFD1-220ENST00000556486 FGF12P61328 243 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms