RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 RNF133Q8WVZ7 376 aa13.48□□□□□ -0.25
CHGA-204ENST00000556076 DACT3Q96B18 629 aaPredicted RBP13.48□□□□□ -0.25
CHGA-204ENST00000556076 SGK3Q96BR1 496 aa13.48□□□□□ -0.25
CHGA-204ENST00000556076 C1orf147Q96MC9 270 aaPredicted RBP13.48□□□□□ -0.25
CHGA-204ENST00000556076 MRI1Q9BV20 369 aa13.48□□□□□ -0.25
CHGA-204ENST00000556076 MARCH7Q9H992 704 aa13.48□□□□□ -0.25
CHGA-204ENST00000556076 PAPOLBQ9NRJ5 636 aaKnown RBP13.48□□□□□ -0.25
CHGA-204ENST00000556076 MIOXQ9UGB7 285 aa13.48□□□□□ -0.25
CHGA-204ENST00000556076 NUP50Q9UKX7 468 aa13.48□□□□□ -0.25
CHGA-204ENST00000556076 MDFIC2A0A1B0GVS7 189 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 C22orf46C9J442 243 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 G3V2T6 193 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 M0R129 80 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 GLCEO94923 617 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 CFPP27918 469 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 HSD11B1P28845 292 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 OPRL1P41146 370 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 UBA52P62987 128 aaKnown RBP13.47□□□□□ -0.25
CHGA-204ENST00000556076 CSNK2BP67870 215 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 FAM3AP98173 230 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 CDK5Q00535 292 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 FAHD1Q6P587 224 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 ZDHHC13Q8IUH4 622 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 C1orf87Q8N0U7 546 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 PARP8Q8N3A8 854 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 TEX29Q8N6K0 151 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 CELF2-AS1Q8N7Q2 184 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 OR8B3Q8NGG8 313 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 FAM216AQ8WUB2 273 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 GCDHQ92947 438 aaPredicted RBP13.47□□□□□ -0.25
CHGA-204ENST00000556076 SEH1LQ96EE3 360 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 REEP6Q96HR9 211 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 PLEKHA8Q96JA3 519 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 OR8B2Q96RD0 313 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 FN3KRPQ9HA64 309 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 SMURF1Q9HCE7 757 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 RNF7Q9UBF6 113 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 ENOPH1Q9UHY7 261 aa13.47□□□□□ -0.25
CHGA-204ENST00000556076 A0A1B0GW55 424 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 A6NLC8 198 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 PRR23D1E9PI22 279 aaPredicted RBP13.46□□□□□ -0.25
CHGA-204ENST00000556076 TRIM77I1YAP6 450 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 GMDSO60547 372 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 GYPAP02724 150 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 DUX4L2P0CJ85 424 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 DUX4L3P0CJ86 424 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 DUX4L4P0CJ87 422 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 DUX4L5P0CJ88 424 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 DUX4L6P0CJ89 424 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 DUX4L7P0CJ90 424 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 PRR23D2P0DMB1 279 aaPredicted RBP13.46□□□□□ -0.25
CHGA-204ENST00000556076 FPR2P25090 351 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 ESRRGP62508 458 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 GRB2P62993 217 aaKnown RBP13.46□□□□□ -0.25
CHGA-204ENST00000556076 OR8B8Q15620 311 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 TIGD6Q17RP2 521 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 WDR25Q64LD2 544 aaPredicted RBP13.46□□□□□ -0.25
CHGA-204ENST00000556076 ZFP1Q6P2D0 407 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 DUX4L9Q6RFH8 374 aaPredicted RBP13.46□□□□□ -0.25
CHGA-204ENST00000556076 THEM6Q8WUY1 208 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 ZFAND2BQ8WV99 257 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 RAB40AQ8WXH6 277 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 SPSB4Q96A44 273 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 TECTBQ96PL2 329 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 NUDT16L1Q9BRJ7 211 aaKnown RBP13.46□□□□□ -0.25
CHGA-204ENST00000556076 TTTY10Q9BZA0 68 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 PRRG3Q9BZD7 231 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 SLC25A19Q9HC21 320 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 MRPL15Q9P015 296 aaKnown RBP13.46□□□□□ -0.25
CHGA-204ENST00000556076 DUX4Q9UBX2 424 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 CLN8Q9UBY8 286 aa13.46□□□□□ -0.25
CHGA-204ENST00000556076 TRAV40A0A0B4J280 105 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 hCG_38984A0A1B0GV85 526 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 hCG_1807616A0A1W2PRN6 198 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 DNAJC9-AS1A6NH13 148 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 PSMD9O00233 223 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 XRCC2O43543 280 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 PTBP3O95758 552 aaKnown RBP13.45□□□□□ -0.26
CHGA-204ENST00000556076 TFF1P04155 84 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 SFTPBP07988 381 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 MRPL3P09001 348 aaKnown RBP13.45□□□□□ -0.26
CHGA-204ENST00000556076 H2BFMP0C1H6 154 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 PSMB10P40306 273 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 GSK3AP49840 483 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 DAPP51397 102 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 CRISP1P54107 249 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 GMFBP60983 142 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 ACTR3P61158 418 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 TUSC1Q2TAM9 212 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 LRRN1Q6UXK5 716 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 BRD3OSQ6XYD6 125 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 DCDC5Q6ZRR9 648 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 C11orf53Q8IXP5 236 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 GCSAMQ8N6F7 178 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 LRTOMTQ8WZ04 291 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 CENPNQ96H22 339 aaPredicted RBP13.45□□□□□ -0.26
CHGA-204ENST00000556076 PGAM5Q96HS1 289 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 LYZL4Q96KX0 146 aa13.45□□□□□ -0.26
CHGA-204ENST00000556076 RAB3IPQ96QF0 476 aaPredicted RBP13.45□□□□□ -0.26
CHGA-204ENST00000556076 OSBPL10Q9BXB5 764 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms