RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 GGT3PA6NGU5 568 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ACOT8O14734 319 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 GADD45GO95257 159 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 HLA-DQA2P01906 255 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 PRKXP51817 358 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 FAM3AP98173 230 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 TSPAN31Q12999 210 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 KLRD1Q13241 179 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DCXRQ7Z4W1 244 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ZDHHC21Q8IVQ6 265 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SPERTQ8NA61 448 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ZNF511Q8NB15 262 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ST8SIA4Q92187 359 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SPTSSAQ969W0 71 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 PYURFQ96I23 114 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 AJUBAQ96IF1 538 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 BTBD10Q9BSF8 475 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 NMNAT2Q9BZQ4 307 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 FGF23Q9GZV9 251 aaPredicted RBP11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 TCF7L1Q9HCS4 588 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SAMD4AQ9UPU9 718 aaKnown RBP11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 NOP16Q9Y3C1 178 aaKnown RBP11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 NOTCH3Q9UM47 2321 aa11.77□□□□□ -0.53
CHMP4BP1-201ENST00000556017 TFF1P04155 84 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 MSX2P35548 267 aaPredicted RBP11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 TGM4P49221 684 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SPIBQ01892 262 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 LINC01590Q5TEZ4 76 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 STUMQ69YW2 141 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ZNF770Q6IQ21 691 aaPredicted RBP11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 GDPGP1Q6ZNW5 385 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SLC16A9Q7RTY1 509 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 LNX2Q8N448 690 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 PNKDQ8N490 385 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 OR1M1Q8NGA1 313 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 C8orf46Q8TAG6 207 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 FAM110DQ8TAY7 271 aaPredicted RBP11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 LRRC29Q8WV35 223 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SGK3Q96BR1 496 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SLAMF6Q96DU3 332 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 KCNJ15Q99712 375 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 TLNRD1Q9H1K6 362 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 RNPEPL1Q9HAU8 725 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SIRT7Q9NRC8 400 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 IL20Q9NYY1 176 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 KIF17Q9P2E2 1029 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 VPREB3Q9UKI3 123 aa11.76□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ZNF816-ZNF321PA0A0X1KG74 233 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 hCG_38984A0A1B0GV85 526 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 A0A1B0GVI7 797 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 hCG_1807616A0A1W2PRN6 198 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 A6NLC8 198 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 GYPBP06028 91 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 CLUP10909 449 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 MUC1P15941 1255 aaPredicted RBP11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ZNF823P16415 610 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 RRM2P31350 389 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 HMGA2P52926 109 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 BEAN1Q3B7T3 259 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 TEX30Q5JUR7 227 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ATPAF1Q5TC12 328 aaPredicted RBP11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 HCP5Q6MZN7 132 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SCCPDHQ8NBX0 429 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SLC37A3Q8NCC5 494 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 OR9Q2Q8NGE9 314 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 OR9Q1Q8NGQ5 310 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 C17orf50Q8WW18 174 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 UBE2FQ969M7 185 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DMRTB1Q96MA1 342 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 AMELYQ99218 206 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DCTN5Q9BTE1 182 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 WDR13Q9H1Z4 485 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 KRCC1Q9NPI7 259 aaPredicted RBP11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ZNF446Q9NWS9 450 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 CD300AQ9UGN4 299 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 PRPF19Q9UMS4 504 aaKnown RBP11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 CDH10Q9Y6N8 788 aa11.75□□□□□ -0.53
CHMP4BP1-201ENST00000556017 G3V4G9 280 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 NDUFAB1O14561 156 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 NPFFO15130 113 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SMIM11AP58511 58 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 MXRA7P84157 204 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 EGR3Q06889 387 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 CRMP1Q14194 572 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 KRT72Q14CN4 511 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 KPRPQ5T749 579 aaPredicted RBP11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SLC35E4Q6ICL7 350 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 CRIP3Q6Q6R5 217 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 PROKR2Q8NFJ6 384 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 OR5T2Q8NGG2 359 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 OR4Q3Q8NH05 313 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 PPP1R35Q8TAP8 253 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 GNPDA2Q8TDQ7 276 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 NPRL2Q8WTW4 380 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 ITPKCQ96DU7 683 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 COPS4Q9BT78 406 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 DPAGT1Q9H3H5 408 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 SPAG4Q9NPE6 437 aa11.74□□□□□ -0.53
CHMP4BP1-201ENST00000556017 IL1RAPQ9NPH3 570 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms