RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 MARCH1Q8TCQ1 289 aa14.31□□□□□ -0.12
TUBB3-209ENST00000555609 RNF141Q8WVD5 230 aa14.31□□□□□ -0.12
TUBB3-209ENST00000555609 TMEM41AQ96HV5 264 aa14.31□□□□□ -0.12
TUBB3-209ENST00000555609 NKX6-2Q9C056 277 aaPredicted RBP14.31□□□□□ -0.12
TUBB3-209ENST00000555609 HRH3Q9Y5N1 445 aa14.31□□□□□ -0.12
TUBB3-209ENST00000555609 CACNA1CQ13936 2221 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 A0A0A6YYD4 124 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 C2orf72A6NCS6 295 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 EEF1E1-BLOC1S5C9J1V9 151 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 ATP6V1G2-DDX39BF2Z307 99 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 H3BML4 177 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 MFNGO00587 321 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 TRAF3IP2O43734 574 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-209ENST00000555609 MPIG6BO95866 241 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 LIPCP11150 499 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 CD79AP11912 226 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 PTGDSP41222 190 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 ECI1P42126 302 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 ZNF121P58317 390 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-209ENST00000555609 LSM6P62312 80 aaKnown RBP14.3□□□□□ -0.12
TUBB3-209ENST00000555609 EIF5AP63241 154 aaKnown RBP14.3□□□□□ -0.12
TUBB3-209ENST00000555609 ECH1Q13011 328 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 SURF2Q15527 256 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-209ENST00000555609 HYAL4Q2M3T9 481 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 ABHD12BQ7Z5M8 362 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-209ENST00000555609 BAP18Q8IXM2 172 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 PNLDC1Q8NA58 520 aaKnown RBP14.3□□□□□ -0.12
TUBB3-209ENST00000555609 OR5H2Q8NGV7 314 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 RHBDD1Q8TEB9 315 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 DNASE2BQ8WZ79 361 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 SEC61A2Q9H9S3 476 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 FN3KRPQ9HA64 309 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 DNAJB11Q9UBS4 358 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 C19orf25Q9UFG5 118 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-209ENST00000555609 CSAG2Q9Y5P2 127 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 PCNX3Q9H6A9 2034 aa14.3□□□□□ -0.12
TUBB3-209ENST00000555609 ZNF726A6NNF4 738 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 PET100P0DJ07 73 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 SLC6A9P48067 706 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 DCDP81605 110 aaKnown RBP14.29□□□□□ -0.12
TUBB3-209ENST00000555609 SLC22A6Q4U2R8 563 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 PABPC1L2AQ5JQF8 200 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 PRSS54Q6PEW0 395 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 DRAM2Q6UX65 266 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 C16orf47Q6ZP98 133 aaPredicted RBP14.29□□□□□ -0.12
TUBB3-209ENST00000555609 CPEB2Q7Z5Q1 589 aaKnown RBP14.29□□□□□ -0.12
TUBB3-209ENST00000555609 LHFPL1Q86WI0 220 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 OR2M3Q8NG83 312 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 DCUN1D4Q92564 292 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 PMEPA1Q969W9 287 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 C10orf35Q96D05 121 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 WDR77Q9BQA1 342 aaPredicted RBP14.29□□□□□ -0.12
TUBB3-209ENST00000555609 RNF126Q9BV68 326 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 OR10A2Q9H208 303 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 METTL7AQ9H8H3 244 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 PNRC2Q9NPJ4 139 aaKnown RBP14.29□□□□□ -0.12
TUBB3-209ENST00000555609 GPR84Q9NQS5 396 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 PCDHB10Q9UN67 800 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 FLVCR1Q9Y5Y0 555 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 ALPK2Q86TB3 2170 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 LOC100509620A0A075B734 347 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 TMEM218A2RU14 115 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 FIGNL2A6NMB9 653 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 ATG12O94817 140 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 HCKP08631 526 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 THBS4P35443 961 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 AFF3P51826 1226 aaKnown RBP14.29□□□□□ -0.12
TUBB3-209ENST00000555609 SLC35A1P78382 337 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 DEFA5Q01523 94 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 ATXN7L3Q14CW9 347 aaPredicted RBP14.29□□□□□ -0.12
TUBB3-209ENST00000555609 PLAC9Q5JTB6 97 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 PDSS1Q5T2R2 415 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 SHISA6Q6ZSJ9 500 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 Q6ZSR3 168 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 SVBPQ8N300 66 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 SLC25A45Q8N413 288 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 ARL11Q969Q4 196 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 PCDHB16Q9NRJ7 776 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 MYOTQ9UBF9 498 aa14.29□□□□□ -0.12
TUBB3-209ENST00000555609 EXPH5Q8NEV8 1989 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 A0A087WZY1 265 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 C13orf42A0A1B0GVH6 325 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 AQP7P3A6NL99 342 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 IGLV3-1P01715 115 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 PGAM2P15259 253 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 ABOP16442 354 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 ZNF43P17038 809 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 TMEM50BP56557 158 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 AIMP2Q13155 320 aaKnown RBP14.28□□□□□ -0.12
TUBB3-209ENST00000555609 BEX5Q5H9J7 111 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 PTCRAQ6ISU1 281 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-209ENST00000555609 ATRAIDQ6UW56 229 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 COMMD2Q86X83 199 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 FADS6Q8N9I5 356 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 OR14K1Q8NGZ2 314 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 AQP10Q96PS8 301 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 NUDT22Q9BRQ3 303 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 NICN1Q9BSH3 213 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 ZNF416Q9BWM5 594 aa14.28□□□□□ -0.12
TUBB3-209ENST00000555609 PHF7Q9BWX1 381 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms