RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 OR8B8Q15620 311 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 HFEQ30201 348 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 TP53I3Q53FA7 332 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 DMRTC1Q5HYR2 192 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 C6orf52Q5T4I8 152 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 DEGS2Q6QHC5 323 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF540Q8NDQ6 660 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 C19orf18Q8NEA5 215 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 OR52H1Q8NGJ2 320 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 OR2T27Q8NH04 317 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 CNIH3Q8TBE1 160 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 CYGBQ8WWM9 190 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 NIPAL2Q9H841 368 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 YAE1D1Q9NRH1 226 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 UFSP2Q9NUQ7 469 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 MYRFQ9Y2G1 1151 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 R4GMQ9 66 aa10.41□□□□□ -0.74
SYNE2-214ENST00000554928 NF1P21359 2839 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 YLPM1P49750 1951 aaKnown RBP10.4□□□□□ -0.74
SYNE2-214ENST00000554928 H3BSH0 61 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF254O75437 659 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 IGLV3-1P01715 115 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 IGHV2-70P01814 119 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 APOC1P02654 83 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 GNAO1P09471 354 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 HOXB4P17483 251 aaPredicted RBP10.4□□□□□ -0.74
SYNE2-214ENST00000554928 DCTDP32321 178 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 ATP6V1E1P36543 226 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 CD200P41217 278 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 CHN2P52757 468 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 ISL1P61371 349 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 IL5RAQ01344 420 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 EGR3Q06889 387 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 POU4F2Q12837 409 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 ZMYND11Q15326 602 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF691Q5VV52 312 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 LIPNQ5VXI9 398 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 MEDAGQ5VYS4 303 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 LAIR2Q6ISS4 152 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF826PQ6ZT77 177 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 PACRGLQ8N7B6 248 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 YIPF7Q8N8F6 280 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 OR51E1Q8TCB6 317 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 RORBQ92753 470 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 RFKQ969G6 155 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 FAM71F1Q96KD3 344 aaPredicted RBP10.4□□□□□ -0.74
SYNE2-214ENST00000554928 RDH12Q96NR8 316 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 MNTQ99583 582 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 ZNF649Q9BS31 505 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 DCLRE1BQ9H816 532 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 LPAR2Q9HBW0 351 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 GPR84Q9NQS5 396 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 ACOXLQ9NUZ1 547 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 MRPL15Q9P015 296 aaKnown RBP10.4□□□□□ -0.74
SYNE2-214ENST00000554928 NUFIP1Q9UHK0 495 aaKnown RBP10.4□□□□□ -0.74
SYNE2-214ENST00000554928 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.4□□□□□ -0.74
SYNE2-214ENST00000554928 GTF2A1LQ9UNN4 478 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 PPP1R3CQ9UQK1 317 aa10.4□□□□□ -0.74
SYNE2-214ENST00000554928 EXOGQ9Y2C4 368 aaKnown RBP10.4□□□□□ -0.74
SYNE2-214ENST00000554928 SONP18583 2426 aaKnown RBP10.39□□□□□ -0.75
SYNE2-214ENST00000554928 NSD1Q96L73 2696 aaPredicted RBP10.39□□□□□ -0.75
SYNE2-214ENST00000554928 A0A1B0GTI1 187 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 METTL15A6NJ78 407 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 LOC110117498-PIK3R3F6TDL0 507 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 TMEM178BH3BS89 294 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 P2RY10O00398 339 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 PHYHO14832 338 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 LMX1BO60663 402 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 FAM20BO75063 409 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 TNFRSF1AP19438 455 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 KIR3DL2P43630 455 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 SRP9P49458 86 aaKnown RBP10.39□□□□□ -0.75
SYNE2-214ENST00000554928 OR12D2P58182 307 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 CSNK2BP67870 215 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 SLC34A1Q06495 639 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 ODF4Q2M2E3 257 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 ZNF829Q3KNS6 432 aaPredicted RBP10.39□□□□□ -0.75
SYNE2-214ENST00000554928 CYB5R2Q6BCY4 276 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 PRSS35Q8N3Z0 413 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 ZNF555Q8NEP9 628 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 HPSE2Q8WWQ2 592 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 C1orf159Q96HA4 380 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 ADI1Q9BV57 179 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 OPA3Q9H6K4 179 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 SP140LQ9H930 580 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 OR52A1Q9UKL2 312 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 NPTNQ9Y639 398 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 SETD2Q9BYW2 2564 aaPredicted RBP10.39□□□□□ -0.75
SYNE2-214ENST00000554928 TANC2Q9HCD6 1990 aa10.39□□□□□ -0.75
SYNE2-214ENST00000554928 A0A0U1RQV5 110 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 ISPDA4D126 451 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 A6NIN4 97 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 ANKRD30BLA7E2S9 258 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 ZNF850A8MQ14 1090 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 PTBP3O95758 552 aaKnown RBP10.38□□□□□ -0.75
SYNE2-214ENST00000554928 IGHV2-5P01817 119 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 KRT8P05787 483 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 GRPP07492 148 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 THBS2P35442 1172 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 DDOSTP39656 456 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms