RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ZNF7P17097 686 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 IL1RNP18510 177 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ATP6V1B2P21281 511 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PCMT1P22061 227 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 COX7A1P24310 79 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CD1BP29016 333 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 HTR1FP30939 366 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 SDC4P31431 198 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 DNASE1L1P49184 302 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CCT3P49368 545 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CAV2P51636 162 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 AIF1P55008 147 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 APOC4P55056 127 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PKNOX1P55347 436 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 WNT4P56705 351 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 UBE2HP62256 183 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 GNB2P62879 340 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ASPHQ12797 758 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 IL24Q13007 206 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 EIF4EBP2Q13542 120 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ARFRP1Q13795 201 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 GRB7Q14451 532 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 GPRC6AQ5T6X5 926 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 FRMPD2BQ6IN97 320 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 TMEM220Q6QAJ8 160 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 KDELC1Q6UW63 502 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 IGFL2Q6UWQ7 119 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 HSDL2Q6YN16 418 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PRSS41Q7RTY9 318 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF679Q8IYX0 411 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ZCCHC7Q8N3Z6 543 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 MFSD9Q8NBP5 474 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 OR4K14Q8NGD5 310 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 OR5AR1Q8NGP9 310 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 LILRB4Q8NHJ6 448 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 FAM57AQ8TBR7 257 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 BRSK1Q8TDC3 778 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 SKA2Q8WVK7 121 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 RXFP2Q8WXD0 754 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 DCUN1D4Q92564 292 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ISG20Q96AZ6 181 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PAGE5Q96GU1 130 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 SLC41A3Q96GZ6 507 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF641Q96N77 438 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 MCEEQ96PE7 176 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 SLC38A2Q96QD8 506 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PSKH2Q96QS6 385 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CLCC1Q96S66 551 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 NPY6RQ99463 290 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 TMEM43Q9BTV4 400 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CAPS2Q9BXY5 557 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 PARD6BQ9BYG5 372 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 REG4Q9BYZ8 158 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 RBKSQ9H477 322 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 REEP4Q9H6H4 257 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 LRRC40Q9H9A6 602 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 NHEJ1Q9H9Q4 299 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 EML4Q9HC35 981 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 POLE4Q9NR33 117 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 AIG1Q9NVV5 245 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 EXTL2Q9UBQ6 330 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF282Q9UDV7 671 aaPredicted RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CLEC4AQ9UMR7 237 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 TRAF3IP3Q9Y228 551 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 ASF1AQ9Y294 204 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 RPL36Q9Y3U8 105 aaKnown RBP1.04□□□□□ -2.24
PRPF39-208ENST00000554785 CDH10Q9Y6N8 788 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 V9GY05 133 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 STAB2Q8WWQ8 2551 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 IGHV3OR16-13A0A075B7E8 117 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 A0A0J9YYE9 177 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 IQANK1A0A1B0GTG1 560 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TCRBV9S1A1TA0A576 114 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 A6NIZ1 184 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 OR5K4A6NMS3 321 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 IQCF5A8MTL0 148 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 C2orf74A8MZ97 194 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 KCNK1O00180 336 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 KMOO15229 486 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 PIN1P1O15428 100 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 RIPK2O43353 540 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 MED7O43513 233 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TCF21O43680 179 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 KLRC4O43908 158 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 RAMP3O60896 148 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 POP7O75817 140 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TRBC1P01850 177 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 PAEPP09466 180 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 UGT2B7P16662 529 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 NPR2P20594 1047 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 OMGP23515 440 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 PEBP1P30086 187 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 SHMT2P34897 504 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 SRP14P37108 136 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 DDOSTP39656 456 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 SSR1P43307 286 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 MAGEA8P43361 318 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 KIR2DS4P43632 304 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 SPINT3P49223 89 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 CYB561P49447 251 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms