RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 RIPK1Q13546 671 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 KLHL12Q53G59 568 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 SLC35D3Q5M8T2 416 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 GLYATL3Q5SZD4 288 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 C12orf73Q69YU5 71 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 CPOQ8IVL8 374 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 TIGD4Q8IY51 512 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 PACRGLQ8N7B6 248 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 TCEANCQ8N8B7 351 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 ZNF454Q8N9F8 522 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 ZNF555Q8NEP9 628 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 OR52H1Q8NGJ2 320 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 OR2AE1Q8NHA4 323 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 RNF133Q8WVZ7 376 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 SPSB4Q96A44 273 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 NEIL1Q96FI4 390 aaPredicted RBP7.32□□□□□ -1.24
ACTN1-213ENST00000554508 JMJD8Q96S16 334 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 MBOAT4Q96T53 435 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 ABHD6Q9BV23 337 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 SUCNR1Q9BXA5 334 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 OR51V1Q9H2C8 321 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 FN3KRPQ9HA64 309 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 IMPAD1Q9NX62 359 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 RNF7Q9UBF6 113 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 GMPPBQ9Y5P6 360 aa7.32□□□□□ -1.24
ACTN1-213ENST00000554508 LOC100130705A0A1B0GUX0 176 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 TRAPPC2LH3BP13 241 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 FAM20BO75063 409 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 VENTXO95231 258 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 ANXA2P07355 339 aaKnown RBP7.31□□□□□ -1.24
ACTN1-213ENST00000554508 LYNP07948 512 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 H2BFMP0C1H6 154 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 RPS2P15880 293 aaKnown RBP7.31□□□□□ -1.24
ACTN1-213ENST00000554508 ZNF12P17014 697 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 CFL1P23528 166 aaKnown RBP7.31□□□□□ -1.24
ACTN1-213ENST00000554508 PMELP40967 661 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 CX3CR1P49238 355 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 PRSS12P56730 875 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 RPS7P62081 194 aaKnown RBP7.31□□□□□ -1.24
ACTN1-213ENST00000554508 SRSF2Q01130 221 aaKnown RBP7.31□□□□□ -1.24
ACTN1-213ENST00000554508 ANK2Q01484 3957 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 ZNF154Q13106 437 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 KCNJ8Q15842 424 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 SNCBQ16143 134 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 TIGD6Q17RP2 521 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 ZNF404Q494X3 552 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 DCDC5Q6ZRR9 648 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.31□□□□□ -1.24
ACTN1-213ENST00000554508 OR8B3Q8NGG8 313 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 OTOSQ8NHW6 89 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 FAM81AQ8TBF8 368 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 TMEM163Q8TC26 289 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 NRG4Q8WWG1 115 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 CYGBQ8WWM9 190 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 SGK3Q96BR1 496 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 ZMYND19Q96E35 227 aaPredicted RBP7.31□□□□□ -1.24
ACTN1-213ENST00000554508 RDH12Q96NR8 316 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 OR8B2Q96RD0 313 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 IL4I1Q96RQ9 567 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 TMEM246Q9BRR3 403 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 ADAT1Q9BUB4 502 aaKnown RBP7.31□□□□□ -1.24
ACTN1-213ENST00000554508 SSBP3Q9BWW4 388 aaPredicted RBP7.31□□□□□ -1.24
ACTN1-213ENST00000554508 VCX3BQ9H321 246 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 NIPAL2Q9H841 368 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 TRIM36Q9NQ86 728 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 MMP26Q9NRE1 261 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 C14orf119Q9NWQ9 140 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 FAM118AQ9NWS6 357 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 H2AFY2Q9P0M6 372 aaPredicted RBP7.31□□□□□ -1.24
ACTN1-213ENST00000554508 OR5V1Q9UGF6 321 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 OPN4Q9UHM6 478 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 N6AMT1Q9Y5N5 214 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 INSIG2Q9Y5U4 225 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 AUP1Q9Y679 476 aa7.31□□□□□ -1.24
ACTN1-213ENST00000554508 IGHV3-64DA0A0J9YX35 117 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 ANKRD30BLA7E2S9 258 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 TRIM77I1YAP6 450 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 TBX1O43435 398 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 NDUFA2O43678 99 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 ZNF205O95201 554 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 FSHBP01225 129 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 PPIAL4GP0DN37 164 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 SLC2A1P11166 492 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 ADRA2CP18825 462 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 RBMXP38159 391 aaKnown RBP7.3□□□□□ -1.24
ACTN1-213ENST00000554508 OPRL1P41146 370 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 HILS1P60008 231 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 SEC61A1P61619 476 aaKnown RBP7.3□□□□□ -1.24
ACTN1-213ENST00000554508 GNB2P62879 340 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 FAM3AP98173 230 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 PAX8Q06710 450 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 HNRNPA0Q13151 305 aaKnown RBP7.3□□□□□ -1.24
ACTN1-213ENST00000554508 APOFQ13790 326 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 MPPED2Q15777 294 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 ARMCX4Q5H9R4 360 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 PRAMEF6Q5VXH4 476 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 BTNL3Q6UXE8 466 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 LRRN1Q6UXK5 716 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 FAM57BQ71RH2 274 aa7.3□□□□□ -1.24
ACTN1-213ENST00000554508 SPATC1Q76KD6 591 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms