RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 GRINAQ7Z429 371 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 FAM220AQ7Z4H9 259 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 TMED4Q7Z7H5 227 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 RANBP3LQ86VV4 465 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-225ENST00000554214 VRK2Q86Y07 508 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 FAM71AQ8IYT1 594 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 DAW1Q8N136 415 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 ZFP82Q8N141 532 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 ABHD12Q8N2K0 398 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 SFRP1Q8N474 314 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 RYBPQ8N488 228 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-225ENST00000554214 CCDC71LQ8N9Z2 235 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 OR51D1Q8NGF3 324 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 OR13C9Q8NGT0 318 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 COQ8AQ8NI60 647 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 CXorf40AQ8TE69 158 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 SMPDL3AQ92484 453 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 MRPS31Q92665 395 aaKnown RBP3.79□□□□□ -1.8
ATXN3-225ENST00000554214 CDS1Q92903 461 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 SLC38A4Q969I6 547 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 C4orf36Q96KX1 117 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 SENP8Q96LD8 212 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 FER1L6-AS2Q96M78 137 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 COL21A1Q96P44 957 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 PANX3Q96QZ0 392 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 VAT1Q99536 393 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 KLF6Q99612 283 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-225ENST00000554214 VPS25Q9BRG1 176 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 ZNF426Q9BUY5 554 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 KATNB1Q9BVA0 655 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 FICDQ9BVA6 458 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 GPR174Q9BXC1 333 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 ULBP1Q9BZM6 244 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 NKX6-2Q9C056 277 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-225ENST00000554214 IL22Q9GZX6 179 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 ACTL8Q9H568 366 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 FAM96AQ9H5X1 160 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 EGLN3Q9H6Z9 239 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 MTHFD2LQ9H903 347 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-225ENST00000554214 TPT1P8Q9HAU6 139 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 DNAJC4Q9NNZ3 241 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 PLSCR3Q9NRY6 295 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 NLE1Q9NVX2 485 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-225ENST00000554214 SLCO1C1Q9NYB5 712 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 STOX2Q9P2F5 926 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-225ENST00000554214 SLC17A7Q9P2U7 560 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 ARMCX3Q9UH62 379 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-225ENST00000554214 SMPXQ9UHP9 88 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 ANAPC7Q9UJX3 599 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 DKKL1Q9UK85 242 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 HSPB11Q9Y547 144 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 MYO9AB2RTY4 2548 aa3.79□□□□□ -1.8
ATXN3-225ENST00000554214 SCN1AP35498 2009 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 PTPRQQ9UMZ3 2332 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 PLXNA2O75051 1894 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 TRAV24A0A0B4J272 114 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 A0A1B0GUH1 482 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 A0A1W2PQL4 384 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-225ENST00000554214 OR52A4PA6NMU1 304 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 F8WDY8 70 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 K7ERI5 159 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 CYB561D2O14569 222 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 ARPC3O15145 178 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 INPP4BO15327 924 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 SLC16A4O15374 487 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 FAM189A1O60320 539 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 RAMP3O60896 148 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 ATP6AP2O75787 350 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 RPLP0P05388 317 aaKnown RBP3.78□□□□□ -1.8
ATXN3-225ENST00000554214 C8GP07360 202 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 KCNE1P15382 129 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 UQCRC2P22695 453 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 SLC2A5P22732 501 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 TUBG1P23258 451 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 SLC6A1P30531 599 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 CD80P33681 288 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 GGT2P36268 569 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 PMELP40967 661 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 MATKP42679 507 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 KCNJ1P48048 391 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 GCLMP48507 274 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 NPY4RP50391 375 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 PLA2G16P53816 162 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 FGF8P55075 233 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-225ENST00000554214 SNU13P55769 128 aaKnown RBP3.78□□□□□ -1.8
ATXN3-225ENST00000554214 NME5P56597 212 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 CLDN15P56746 228 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 ERVS71-1P61550 626 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 PPP3R1P63098 170 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 PITPNAQ00169 270 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 IL5RAQ01344 420 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 DHODHQ02127 395 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 OGDHQ02218 1023 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 SLC10A7Q0GE19 358 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 TAF1AQ15573 450 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-225ENST00000554214 MAPK11Q15759 364 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 IMPG1Q17R60 797 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 EXOC3L2Q2M3D2 409 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 Q5BKY6 102 aa3.78□□□□□ -1.8
ATXN3-225ENST00000554214 ZRANB3Q5FWF4 1079 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms