RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-208	ENST00000553846	SPRYD4	Q8WW59	207 aa	Predicted RBP	7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	RASSF5	Q8WWW0	418 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	MAP6	Q96JE9	813 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	PRRC1	Q96M27	445 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	TSSK2	Q96PF2	358 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	ATF6B	Q99941	703 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	EBF4	Q9BQW3	602 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	DNTTIP1	Q9H147	329 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	MUC13	Q9H3R2	512 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	CENPH	Q9H3R5	247 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	GRHPR	Q9UBQ7	328 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	CYB5R1	Q9UHQ9	305 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	RPS6KA6	Q9UK32	745 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	SF3B6	Q9Y3B4	125 aa	Known RBP	7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846	ALMS1	Q8TCU4	4167 aa		7.29	□□□□□ -1.24
PRKCH-208	ENST00000553846		A0A087WUU8	490 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	hCG_1807616	A0A1W2PRN6	198 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846		A0A1W2PRX2	142 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	EFCAB9	A8MZ26	197 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	FXYD1	O00168	92 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	RGS16	O15492	202 aa	Predicted RBP	7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	NDUFB3	O43676	98 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	SYNGR1	O43759	233 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	PTP4A3	O75365	173 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	GRP	P07492	148 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	VIM	P08670	466 aa	Known RBP	7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	PSKH1	P11801	424 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	CDKN2A	P42771	156 aa	Known RBP	7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	IDH3A	P50213	366 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	STX1B	P61266	288 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	ECH1	Q13011	328 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	GLYATL3	Q5SZD4	288 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	PGM2L1	Q6PCE3	622 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	MRPL21	Q7Z2W9	205 aa	Known RBP	7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	ADCK1	Q86TW2	530 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	OR56B2P	Q8NGI1	322 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	OR10A6	Q8NH74	314 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	ANGPTL6	Q8NI99	470 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	MUC7	Q8TAX7	377 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	SPSB4	Q96A44	273 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	DUS3L	Q96G46	650 aa	Known RBP	7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	RAB3IP	Q96QF0	476 aa	Predicted RBP	7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	NKX3-1	Q99801	234 aa	Predicted RBP	7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	WDR13	Q9H1Z4	485 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	PPP1R3E	Q9H7J1	279 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	ZNF222	Q9UK12	451 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	BAG5	Q9UL15	447 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	AURKC	Q9UQB9	309 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	SIGLEC7	Q9Y286	467 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	PCDHGB5	Q9Y5G0	923 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	SNX13	Q9Y5W8	968 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	CAPN7	Q9Y6W3	813 aa		7.28	□□□□□ -1.24
PRKCH-208	ENST00000553846	TMEM120B	A0PK00	339 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846		A6NLC8	198 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846		F5H5K5	113 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846		H0YHG0	523 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	XKRY	O14609	159 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	SIGLEC5	O15389	551 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	ANGPTL7	O43827	346 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	LCAT	P04180	440 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	PF4V1	P10720	104 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	MDH1	P40925	334 aa	Known RBP	7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	GPR4	P46093	362 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	BLCAP	P62952	87 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	ST3GAL3	Q11203	375 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	MALL	Q13021	153 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	DCTN2	Q13561	401 aa	Known RBP	7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	RFX4	Q33E94	735 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	ZBED5	Q49AG3	693 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	AGK	Q53H12	422 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	LRRC10	Q5BKY1	277 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	GPR139	Q6DWJ6	353 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	TSEN54	Q7Z6J9	526 aa	Known RBP	7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	LHFPL4	Q7Z7J7	247 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	TMEM219	Q86XT9	240 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	LINC00346	Q8IVM7	164 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	MRPL41	Q8IXM3	137 aa	Known RBP	7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	MKX	Q8IYA7	352 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	OR6V1	Q8N148	313 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	OR1M1	Q8NGA1	313 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	OR5D13	Q8NGL4	314 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	OR5K1	Q8NHB7	308 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	OR5M11	Q96RB7	305 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	FGF23	Q9GZV9	251 aa	Predicted RBP	7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	ELL3	Q9HB65	397 aa	Predicted RBP	7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	MRPL22	Q9NWU5	206 aa	Known RBP	7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	HAO2	Q9NYQ3	351 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	SLC25A10	Q9UBX3	287 aa	Predicted RBP	7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	POLR1D	Q9Y2S0	133 aa		7.27	□□□□□ -1.25
PRKCH-208	ENST00000553846	ODF3B	A8MYP8	253 aa		7.26	□□□□□ -1.25
PRKCH-208	ENST00000553846		J3KTA2	159 aa		7.26	□□□□□ -1.25
PRKCH-208	ENST00000553846		M0R135	149 aa		7.26	□□□□□ -1.25
PRKCH-208	ENST00000553846	BHLHE40	O14503	412 aa		7.26	□□□□□ -1.25
PRKCH-208	ENST00000553846	ZFPL1	O95159	310 aa		7.26	□□□□□ -1.25
PRKCH-208	ENST00000553846	ACAA1	P09110	424 aa	Predicted RBP	7.26	□□□□□ -1.25
PRKCH-208	ENST00000553846	RAB13	P51153	203 aa		7.26	□□□□□ -1.25
PRKCH-208	ENST00000553846	DYNLT3	P51808	116 aa		7.26	□□□□□ -1.25
PRKCH-208	ENST00000553846	KLHL12	Q53G59	568 aa		7.26	□□□□□ -1.25
PRKCH-208	ENST00000553846	RABL3	Q5HYI8	236 aa		7.26	□□□□□ -1.25
PRKCH-208	ENST00000553846	TBPL2	Q6SJ96	375 aa		7.26	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms