RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 FOXH1O75593 365 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 PTBP3O95758 552 aaKnown RBP8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 ALPLP05186 524 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 GATA3P23771 443 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 GSK3AP49840 483 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 PSMA6P60900 246 aaKnown RBP8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 LCN2P80188 198 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 ROM1Q03395 351 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 MZT1Q08AG7 82 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 DCAF12L2Q5VW00 463 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 PRAMEF6Q5VXH4 476 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 GID4Q8IVV7 300 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 ZNF679Q8IYX0 411 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 FTMTQ8N4E7 242 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 OR11L1Q8NGX0 322 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 ASB17Q8WXJ9 295 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 DVL3Q92997 716 aaPredicted RBP8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 RIBC2Q9H4K1 309 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 FN3KRPQ9HA64 309 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 HAO2Q9NYQ3 351 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 ZNF391Q9UJN7 358 aa8.57□□□□□ -1.04
HNRNPC-208ENST00000553753 PPIAL4EA0A075B759 164 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 TMEM269A0A1B0GVZ9 245 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 CEACAM18A8MTB9 384 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 PPIAL4DF5H284 164 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 FAM20BO75063 409 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 ZNF254O75437 659 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 PPIAL4FP0DN26 164 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 ZFP36P26651 326 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 DCTDP32321 178 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 CXCR4P61073 352 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 GABPB1Q06547 395 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 OR8B8Q15620 311 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 FAM201AQ5SY85 155 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 CSNK2A3Q8NEV1 391 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 OR8J1Q8NGP2 316 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 OR8S1Q8NH09 359 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 RAB3IPQ96QF0 476 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 OR8B4Q96RC9 309 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 ADGRL4Q9HBW9 690 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 C14orf119Q9NWQ9 140 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 COPS3Q9UNS2 423 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 PPIAL4AQ9Y536 164 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 PPIAL4CA0A0B4J2A2 164 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 ACOD1A6NK06 481 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 J3QLI3 93 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 EI24O14681 340 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 AVPP01185 164 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 GRPP07492 148 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 WNT2P09544 360 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 CPT2P23786 658 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 CDC42P60953 191 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 SEC61A1P61619 476 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 SNCBQ16143 134 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 ZNF404Q494X3 552 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 ESCO2Q56NI9 601 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 ZNF322Q6U7Q0 402 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 OR8B12Q8NGG6 310 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 MNTQ99583 582 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 TMEM246Q9BRR3 403 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 PAPOLGQ9BWT3 736 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 TMPRSS13Q9BYE2 586 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 TTTY10Q9BZA0 68 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 FAM206AQ9NX38 181 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 RNF7Q9UBF6 113 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 MIOXQ9UGB7 285 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 WARS2Q9UGM6 360 aaKnown RBP8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 IKZF2Q9UKS7 526 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 POLR3KQ9Y2Y1 108 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 RHBDD3Q9Y3P4 386 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 ORC6Q9Y5N6 252 aa8.56□□□□□ -1.04
HNRNPC-208ENST00000553753 DOCK11Q5JSL3 2073 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 A0A0U1RQV5 110 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 A6NLC8 198 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 PRR32B1ATL7 298 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 F5H0A9 414 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 PHYHO14832 338 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 PHF1O43189 567 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 RPS2P15880 293 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 ACKR3P25106 362 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 HTR1FP30939 366 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 GNALP38405 381 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 ALDH3A2P51648 485 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 RIDAP52758 137 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 SLC35F2Q8IXU6 374 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 CBR4Q8N4T8 237 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 RFLNBQ8N5W9 214 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 TEX29Q8N6K0 151 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 OR51G2Q8NGK0 314 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 TRUB1Q8WWH5 349 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 LYZL4Q96KX0 146 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 C7orf69Q9H7B7 122 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 METTL17Q9H7H0 456 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 PPP1R3EQ9H7J1 279 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 S100A14Q9HCY8 104 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 MMP26Q9NRE1 261 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 C1orf123Q9NWV4 160 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 CLN6Q9NWW5 311 aa8.55□□□□□ -1.04
HNRNPC-208ENST00000553753 USE1Q9NZ43 259 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms