RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.09□□□□□ -0.63
PRPF39-204ENST00000553605 OAFQ86UD1 273 aa11.09□□□□□ -0.63
PRPF39-204ENST00000553605 MKXQ8IYA7 352 aa11.09□□□□□ -0.63
PRPF39-204ENST00000553605 RPS4Y2Q8TD47 263 aa11.09□□□□□ -0.63
PRPF39-204ENST00000553605 RASSF5Q8WWW0 418 aa11.09□□□□□ -0.63
PRPF39-204ENST00000553605 SPDL1Q96EA4 605 aa11.09□□□□□ -0.63
PRPF39-204ENST00000553605 ROPN1BQ9BZX4 212 aaPredicted RBP11.09□□□□□ -0.63
PRPF39-204ENST00000553605 DNTTIP1Q9H147 329 aa11.09□□□□□ -0.63
PRPF39-204ENST00000553605 SYT4Q9H2B2 425 aa11.09□□□□□ -0.63
PRPF39-204ENST00000553605 HEXA-AS1Q9H8Q6 139 aa11.09□□□□□ -0.63
PRPF39-204ENST00000553605 ROPN1Q9HAT0 212 aaPredicted RBP11.09□□□□□ -0.63
PRPF39-204ENST00000553605 ABCB10Q9NRK6 738 aa11.09□□□□□ -0.63
PRPF39-204ENST00000553605 ZNF391Q9UJN7 358 aa11.09□□□□□ -0.63
PRPF39-204ENST00000553605 HUWE1Q7Z6Z7 4374 aaKnown RBP11.09□□□□□ -0.63
PRPF39-204ENST00000553605 TNFRSF1BP20333 461 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 NAA10P41227 235 aaPredicted RBP11.08□□□□□ -0.64
PRPF39-204ENST00000553605 ZNF92Q03936 586 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 MEP1BQ16820 701 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 DGUOKQ16854 277 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 KHDC1LQ5JSQ8 128 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 ZFAND6Q6FIF0 208 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 BLOC1S3Q6QNY0 202 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 WDR82Q6UXN9 313 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 DPY19L4Q7Z388 723 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 TSEN54Q7Z6J9 526 aaKnown RBP11.08□□□□□ -0.64
PRPF39-204ENST00000553605 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 FUNDC1Q8IVP5 155 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 DYNAPQ8N1N2 210 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 OR4X2Q8NGF9 303 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 MED30Q96HR3 178 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 ZNF570Q96NI8 536 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 RCHY1Q96PM5 261 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 PITX2Q99697 317 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 SNTG1Q9NSN8 517 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 HAO2Q9NYQ3 351 aa11.08□□□□□ -0.64
PRPF39-204ENST00000553605 IMPA2O14732 288 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 CD14P08571 375 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 CHATP28329 748 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 SDHAP31040 664 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 CENPAP49450 140 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 CAV3P56539 151 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 TRAP1Q12931 704 aaKnown RBP11.07□□□□□ -0.64
PRPF39-204ENST00000553605 ZNF788Q6ZQV5 615 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 FAM122BQ7Z309 247 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 WDR86Q86TI4 376 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 LNX2Q8N448 690 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 OR13C2Q8NGS9 318 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 OR8S1Q8NH09 359 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 OR2AE1Q8NHA4 323 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 GAFA1Q96PS6 74 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 ATF6BQ99941 703 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 NUAK2Q9H093 628 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 NMNAT1Q9HAN9 279 aaPredicted RBP11.07□□□□□ -0.64
PRPF39-204ENST00000553605 THAP1Q9NVV9 213 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 CCDC167Q9P0B6 97 aa11.07□□□□□ -0.64
PRPF39-204ENST00000553605 FAM90A8PA6NJQ4 464 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 EFCAB9A8MZ26 197 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 TFF1P04155 84 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 MDH1P40925 334 aaKnown RBP11.06□□□□□ -0.64
PRPF39-204ENST00000553605 SLC9A3P48764 834 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 CRYBA2P53672 197 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 TPTEP56180 551 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 GMFBP60983 142 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 STX1BP61266 288 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 CSNK2BP67870 215 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 IL5RAQ01344 420 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 SNAI3Q3KNW1 292 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 PGM2L1Q6PCE3 622 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 DLEU7Q6UYE1 221 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 ETV3LQ6ZN32 361 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 CFAP77Q6ZQR2 320 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 FAM185AQ8N0U4 392 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 OR1M1Q8NGA1 313 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 OR51D1Q8NGF3 324 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 PRR25Q96S07 402 aa11.06□□□□□ -0.64
PRPF39-204ENST00000553605 PAIP2Q9BPZ3 127 aaKnown RBP11.06□□□□□ -0.64
PRPF39-204ENST00000553605 ELL3Q9HB65 397 aaPredicted RBP11.06□□□□□ -0.64
PRPF39-204ENST00000553605 VSX1Q9NZR4 365 aaPredicted RBP11.06□□□□□ -0.64
PRPF39-204ENST00000553605 CDIPTO14735 213 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 SNNO75324 88 aaPredicted RBP11.05□□□□□ -0.64
PRPF39-204ENST00000553605 RHBDL1O75783 438 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 COX7A1P24310 79 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 OR1E2P47887 323 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 MRPL19P49406 292 aaKnown RBP11.05□□□□□ -0.64
PRPF39-204ENST00000553605 THBS3P49746 956 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 ST3GAL3Q11203 375 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 KRR1Q13601 381 aaKnown RBP11.05□□□□□ -0.64
PRPF39-204ENST00000553605 MPP2Q14168 576 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 SLC18B1Q6NT16 456 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 KCTD18Q6PI47 426 aaPredicted RBP11.05□□□□□ -0.64
PRPF39-204ENST00000553605 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 PIGWQ7Z7B1 504 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 LINC00346Q8IVM7 164 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 NRMQ8IXM6 262 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 FAM156AQ8NDB6 213 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 OR56B2PQ8NGI1 322 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 RAB3IPQ96QF0 476 aaPredicted RBP11.05□□□□□ -0.64
PRPF39-204ENST00000553605 ZNF649Q9BS31 505 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 WDR13Q9H1Z4 485 aa11.05□□□□□ -0.64
PRPF39-204ENST00000553605 SSU72Q9NP77 194 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms